| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1194 |
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| Symbol | rfbA1 |
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| ID | 6270688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1100463 |
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| End bp | 1101341 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641725326 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001879840 |
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| Protein GI | 187731110 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGC GTAAGGGTAT TATTTTAGCG GGTGGTTCTG GTACTCGTCT TTATCCTGTG
ACTATGGCAG TCAGTAAACA GCTGCTACCG ATTTATGATA AACCGATGAT CTATTACCCG
CTCTCTACAC TGATGTTGGC GGGTATTCGC GATATTTTGA TTATCAGTAC GCCACAGGAT
ACTCCTCGTT TTCAACAACT GCTGGGTGAC GGGAGCCAGT GGGGCCTGAA TCTTCAGTAC
AAAGTTCAAC CGAGTCCGGA TGGTCTTGCG CAGGCGTTTA TTATCGGTGA AGAGTTTATT
GGTGGTGATG ATTGTGCTTT GGTTCTTGGT GACAATATCT TCTACGGTCA CGATCTGCCG
AAGTTAATGG ATGTAGCTGT TAACAAAGAA AGTGGTGCAA CGGTATTTGC CTATCACGTT
AATGATCCTG AACGCTACGG TGTCGTTGAG TTTGATAAAA ACGGTACGGC GATCAGCCTG
GAAGAAAAAC CGCTACAACC AAAAAGTAAT TATGCGGTAA CCGGGCTTTA TTTCTATGAT
AACGATGTTG TCGAAATGGC GAAAAACCTT AAGCCTTCTG CCCGTGGTGA ACTGGAAATT
ACCGATATTA ACCGTATTTA TATGGAACAG GGGCGTTTAT CTGTTGCTAT GATGGGCCGT
GGTTATGCAT GGCTGGACAC GGGGACACAT CAAAGCCTGA TTGAGGCAAG CAACTTCATT
GCTACAATTG AAGAACGTCA GGGGCTGAAA GTTTCCTGTC TAGAAGAAAT TGCTTACCGT
AAAGGGTTTA TTGATGCTGA GCAAGTAAAA GTGTTAGCAC AACCTCTGAA AAAAAATGCT
TATGGTCAGT ACCTACTAAA AATGATTGAA GGTTATTAA
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| Protein sequence | MKTRKGIILA GGSGTRLYPV TMAVSKQLLP IYDKPMIYYP LSTLMLAGIR DILIISTPQD
TPRFQQLLGD GSQWGLNLQY KVQPSPDGLA QAFIIGEEFI GGDDCALVLG DNIFYGHDLP
KLMDVAVNKE SGATVFAYHV NDPERYGVVE FDKNGTAISL EEKPLQPKSN YAVTGLYFYD
NDVVEMAKNL KPSARGELEI TDINRIYMEQ GRLSVAMMGR GYAWLDTGTH QSLIEASNFI
ATIEERQGLK VSCLEEIAYR KGFIDAEQVK VLAQPLKKNA YGQYLLKMIE GY
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