| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2662 |
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| Symbol | |
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| ID | 4019179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3192830 |
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| End bp | 3193699 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637956706 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_563664 |
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| Protein GI | 91794013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form
[TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGCA TTATTCTCGC CGGTGGTTCA GGGACGCGTT TATATCCATT GACTCGTGGT
GTATCTAAAC AGTTATTGCC AATATATGAC AAACCAATGA TCTACTATCC ATTGTCAGCA
TTAATGCTAG CAGGCATTCG CGATATCTTG ATTATTACTA CGCCAGAAGA CAATGAAGCT
TTTAAGCGTT TATTAGGTGA TGGTTCAGAT TTCGGCATTA ATTTAAGCTA TGAAATTCAG
CCATCACCAG ATGGCTTAGC ACAAGCTTTT ATTATCGGTG CAGAATTTAT CGGTAAAGAC
GGTGTGTGTT TAGTCTTGGG TGATAATATT TTCTATGGCC AGTCTTTTAG TAAAACGCTG
AAGAATGCGG CTAATAAAGA TAGAGGGGCT ACAGTTTTTG GTTATCAAGT GAAAGATCCT
GAACGTTTCG GGGTGGTTGA ATTTGACCAA GATATGAAAG CAATTTCGAT AGAAGAAAAG
CCATTGAAAC CTAAGTCAAA TTATGCGGTA ACAGGACTTT ATTTTTATGA CAACAGAGTC
ATAGAAATGG CAAAGACTGT CAAACCTTCG CTCCGCGGTG AGTTAGAAAT TACAAGCTTA
AATGAAATGT ATTTAAATGA TGGTAGTCTG AGTGTCGAGT TATTAGGTCG CGGCTTTGCT
TGGCTAGACA CGGGAACTCA CGAGAGCTTG CACGAGGCAT CTTCCTTTGT GCAAACTATT
GAGAATGTAC AAGGCCTTAA AGTAGCTTGT TTAGAAGAAA TTGCGTTACG TAATGGTTGG
TTAAGTTCGC AGCAACTTTT AGAACTAGCT AAACCTATGA TGAAGAATAA TTATGGTCAA
TATTTAGCTC GATTAGCTAA CGGATTATAA
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| Protein sequence | MKGIILAGGS GTRLYPLTRG VSKQLLPIYD KPMIYYPLSA LMLAGIRDIL IITTPEDNEA
FKRLLGDGSD FGINLSYEIQ PSPDGLAQAF IIGAEFIGKD GVCLVLGDNI FYGQSFSKTL
KNAANKDRGA TVFGYQVKDP ERFGVVEFDQ DMKAISIEEK PLKPKSNYAV TGLYFYDNRV
IEMAKTVKPS LRGELEITSL NEMYLNDGSL SVELLGRGFA WLDTGTHESL HEASSFVQTI
ENVQGLKVAC LEEIALRNGW LSSQQLLELA KPMMKNNYGQ YLARLANGL
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