Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03170 |
Symbol | rfbA |
ID | 6308012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 4626178 |
End bp | 4627065 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642641739 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001915576 |
Protein GI | 188578647 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAC GTAAAGGCAT TATTTTGGCC GGTGGCTCGG GGACCCGCCT GTATCCGATC ACCAAGGGTG TCAGTAAGCA ACTGCTGCCG GTGTACGACA AGCCGATGAT CTATTACCCG CTGAGCGTCC TGATGCTGGC AGGTATCCGC GATATTTTGA TCATCAATAC GCCGCATGAG CAGGCGTTGT TTCAATCCTT GTTGGGTGAT GGCTCTCAGT GGGGAATTCA CATTCAATAC GCCGTGCAGC CCAGCCCGGA CGGGTTGGCG CAGGCGTATT TGATCGGTCG CGACTTTGTC GATGGCAAGC CGAGTTGCCT GGTATTGGGC GACAATGTTT TTCATGGTCA CGGTTTGACC GAAACGTTAC GCCGCGCAGA CGCGCGCGAG CAGGGCGCGA CCGTGTTCGG TTATTGGGTC ACCGATCCCG AGCGCTACGG CGTGGCCGAA TTCGACCAGC AAGGCAAAGT GATCGATATC GCCGAAAAGC CTGAGAAGCC GCGCTCCAAC TATGCGGTCA CCGGCCTGTA CTTCTACGAT GGAAAAGCCA GCGATTATGC GGCTGCCTTG AAACCTTCTC CGCGTGGCGA GCTGGAGATT ACCGATCTCA ATCGCTGCTA TCTCGATGCT GGCGATCTGC ATCTTGAGCC GCTGGGACGC GGGTATGCAT GGCTGGATAC CGGGACCCAC CAGTCCTTGC ACGAAGCGGC CAACTTCATC GAGACCATCC AGATGCGTCA GGGCCTGCAG GTGTGCTGCC CCGAAGAAAT CGCGTTCGGT CAGGGCTGGA TCGATGCGGA GCAATTGGAG CGTCTGGCCG CCCCGTTGCT GAAAAACGAC TATGGCAAAT ATTTGCACGA ATTGGCTGTG CGAGGAGTAG TACCGTGA
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Protein sequence | MTQRKGIILA GGSGTRLYPI TKGVSKQLLP VYDKPMIYYP LSVLMLAGIR DILIINTPHE QALFQSLLGD GSQWGIHIQY AVQPSPDGLA QAYLIGRDFV DGKPSCLVLG DNVFHGHGLT ETLRRADARE QGATVFGYWV TDPERYGVAE FDQQGKVIDI AEKPEKPRSN YAVTGLYFYD GKASDYAAAL KPSPRGELEI TDLNRCYLDA GDLHLEPLGR GYAWLDTGTH QSLHEAANFI ETIQMRQGLQ VCCPEEIAFG QGWIDAEQLE RLAAPLLKND YGKYLHELAV RGVVP
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