Gene PXO_03170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_03170 
SymbolrfbA 
ID6308012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp4626178 
End bp4627065 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID642641739 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001915576 
Protein GI188578647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC GTAAAGGCAT TATTTTGGCC GGTGGCTCGG GGACCCGCCT GTATCCGATC 
ACCAAGGGTG TCAGTAAGCA ACTGCTGCCG GTGTACGACA AGCCGATGAT CTATTACCCG
CTGAGCGTCC TGATGCTGGC AGGTATCCGC GATATTTTGA TCATCAATAC GCCGCATGAG
CAGGCGTTGT TTCAATCCTT GTTGGGTGAT GGCTCTCAGT GGGGAATTCA CATTCAATAC
GCCGTGCAGC CCAGCCCGGA CGGGTTGGCG CAGGCGTATT TGATCGGTCG CGACTTTGTC
GATGGCAAGC CGAGTTGCCT GGTATTGGGC GACAATGTTT TTCATGGTCA CGGTTTGACC
GAAACGTTAC GCCGCGCAGA CGCGCGCGAG CAGGGCGCGA CCGTGTTCGG TTATTGGGTC
ACCGATCCCG AGCGCTACGG CGTGGCCGAA TTCGACCAGC AAGGCAAAGT GATCGATATC
GCCGAAAAGC CTGAGAAGCC GCGCTCCAAC TATGCGGTCA CCGGCCTGTA CTTCTACGAT
GGAAAAGCCA GCGATTATGC GGCTGCCTTG AAACCTTCTC CGCGTGGCGA GCTGGAGATT
ACCGATCTCA ATCGCTGCTA TCTCGATGCT GGCGATCTGC ATCTTGAGCC GCTGGGACGC
GGGTATGCAT GGCTGGATAC CGGGACCCAC CAGTCCTTGC ACGAAGCGGC CAACTTCATC
GAGACCATCC AGATGCGTCA GGGCCTGCAG GTGTGCTGCC CCGAAGAAAT CGCGTTCGGT
CAGGGCTGGA TCGATGCGGA GCAATTGGAG CGTCTGGCCG CCCCGTTGCT GAAAAACGAC
TATGGCAAAT ATTTGCACGA ATTGGCTGTG CGAGGAGTAG TACCGTGA
 
Protein sequence
MTQRKGIILA GGSGTRLYPI TKGVSKQLLP VYDKPMIYYP LSVLMLAGIR DILIINTPHE 
QALFQSLLGD GSQWGIHIQY AVQPSPDGLA QAYLIGRDFV DGKPSCLVLG DNVFHGHGLT
ETLRRADARE QGATVFGYWV TDPERYGVAE FDQQGKVIDI AEKPEKPRSN YAVTGLYFYD
GKASDYAAAL KPSPRGELEI TDLNRCYLDA GDLHLEPLGR GYAWLDTGTH QSLHEAANFI
ETIQMRQGLQ VCCPEEIAFG QGWIDAEQLE RLAAPLLKND YGKYLHELAV RGVVP