Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1779 |
Symbol | |
ID | 3671443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1878398 |
End bp | 1879279 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637710477 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_315537 |
Protein GI | 74317797 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.149846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA AGGGCATCAT CCTCGCCGGC GGTTCCGGTA CCCGCCTCTA TCCGGCGACC CTGGCAGTCT CGAAGCAGCT GCTGCCGATT TACGACAAGC CGATGATCTA TTACCCGCTC ACGACGCTGA TGCTGGCGGG GATTCAGGAC ATTCTCGTCA TCTCGACCCC GCAGGACACG CCACGCTTCG AGCAGTTGCT CGGCGACGGC AGTCAGTGGG GCATCAATCT GCAGTATGCG GTCCAGGCCA AGCCCGAGGG GCTCGCGCAG GCCTTCGTGA TCGGCGCGGA CTTCGTCGGC AACGGGCCGA GTGCCCTCGT GCTCGGCGAC AATATCTTCT ACGGCCACGA GATGACCGAC GATCTCGGGT CGGCCAGCGT CAGGGACACC GGCGCAACGG TCTTCGCGTA TCGCGTGCAC GATCCGGAAC GTTACGGCGT GGTTGAATTC GACGACGCAG GAAACGCGAT CAGCCTGGAA GAAAAGCCCG CGCAGCCGAA GTCGCATTAC GCCGTCACCG GCCTCTATTT CTACGACAGC CAGGTCGTCG ACATCGCGCG CAATCTCAAG CCCTCGGCGC GCGGCGAACT GGAAATCACT GACGTCAACC GCCACTACCT CGAAGCGGGC GAGCTCAAGG TCTCGATCAT GGGCCGCGGC CACGCCTGGC TCGACACGGG CACCCACGAA TCGATGCTCG AGGCCTCGCT CTTCATCGAG ACGATCGAGA AGCGCCAGGG GCTCAAGATC GCCTGCCCGG AAGAGATTGC GTACCGCAAG CGCTACATCG ACGCCGAACA ACTCGCGAAG CTGGCCGCGC CGATGAAGAA GAACGGCTAC GGAAGGTACC TGCTGGAAAT TCTGGACGAG CATGTCTTCT AG
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Protein sequence | MKRKGIILAG GSGTRLYPAT LAVSKQLLPI YDKPMIYYPL TTLMLAGIQD ILVISTPQDT PRFEQLLGDG SQWGINLQYA VQAKPEGLAQ AFVIGADFVG NGPSALVLGD NIFYGHEMTD DLGSASVRDT GATVFAYRVH DPERYGVVEF DDAGNAISLE EKPAQPKSHY AVTGLYFYDS QVVDIARNLK PSARGELEIT DVNRHYLEAG ELKVSIMGRG HAWLDTGTHE SMLEASLFIE TIEKRQGLKI ACPEEIAYRK RYIDAEQLAK LAAPMKKNGY GRYLLEILDE HVF
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