More than 300 homologs were found in PanDaTox collection
for query gene Sden_2662 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  100 
 
 
289 aa  591  1e-168  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  87.5 
 
 
289 aa  528  1e-149  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  87.46 
 
 
294 aa  526  1e-148  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  87.46 
 
 
294 aa  526  1e-148  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  87.72 
 
 
286 aa  521  1e-147  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  87.37 
 
 
289 aa  517  1e-146  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  86.67 
 
 
286 aa  517  1e-146  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  85.71 
 
 
295 aa  514  1.0000000000000001e-145  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  82.11 
 
 
293 aa  498  1e-140  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  80.77 
 
 
291 aa  496  1e-139  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  81.05 
 
 
293 aa  496  1e-139  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  79.65 
 
 
288 aa  483  1e-135  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  77.94 
 
 
304 aa  460  9.999999999999999e-129  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_1473  glucose-1-phosphate thymidylyltransferase  74.91 
 
 
287 aa  451  1.0000000000000001e-126  Shewanella baltica OS223  Bacteria  normal  0.905305  normal  0.376761 
 
 
-
 
NC_009901  Spea_1399  glucose-1-phosphate thymidylyltransferase  74.48 
 
 
290 aa  451  1.0000000000000001e-126  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3016  glucose-1-phosphate thymidylyltransferase  74.74 
 
 
289 aa  448  1e-125  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00414881  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  75.79 
 
 
291 aa  449  1e-125  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
NC_008321  Shewmr4_1319  glucose-1-phosphate thymidylyltransferase  75.17 
 
 
291 aa  446  1.0000000000000001e-124  Shewanella sp. MR-4  Bacteria  normal  normal  0.0322301 
 
 
-
 
NC_009800  EcHS_A2181  glucose-1-phosphate thymidylyltransferase  73.87 
 
 
289 aa  443  1e-123  Escherichia coli HS  Bacteria  normal  0.112189  n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  72.32 
 
 
293 aa  441  1e-123  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  73.52 
 
 
291 aa  437  9.999999999999999e-123  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  73.78 
 
 
292 aa  440  9.999999999999999e-123  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  72.32 
 
 
289 aa  437  9.999999999999999e-123  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  74.39 
 
 
292 aa  437  1e-121  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  71.08 
 
 
287 aa  433  1e-120  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  72.47 
 
 
293 aa  433  1e-120  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  71.93 
 
 
293 aa  430  1e-119  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  71.58 
 
 
289 aa  429  1e-119  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  72.28 
 
 
293 aa  427  1e-119  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  72.89 
 
 
296 aa  429  1e-119  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  71.93 
 
 
293 aa  430  1e-119  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  69.44 
 
 
294 aa  429  1e-119  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  71.93 
 
 
310 aa  430  1e-119  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  69.44 
 
 
294 aa  429  1e-119  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_007912  Sde_2130  glucose-1-phosphate thymidylyltransferase  70.53 
 
 
288 aa  430  1e-119  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  73.68 
 
 
290 aa  427  1e-119  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  72.28 
 
 
293 aa  429  1e-119  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  72.63 
 
 
293 aa  431  1e-119  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  71.23 
 
 
289 aa  430  1e-119  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  72.63 
 
 
293 aa  431  1e-119  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  69.44 
 
 
294 aa  427  1e-119  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_009253  Dred_3038  glucose-1-phosphate thymidylyltransferase  70.49 
 
 
292 aa  428  1e-119  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  71.48 
 
 
296 aa  424  1e-118  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  70.28 
 
 
296 aa  426  1e-118  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  72.54 
 
 
296 aa  426  1e-118  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
294 aa  427  1e-118  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  70.73 
 
 
297 aa  426  1e-118  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2899  glucose-1-phosphate thymidylyltransferase  70.38 
 
 
287 aa  427  1e-118  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  69.1 
 
 
294 aa  426  1e-118  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  70.88 
 
 
289 aa  425  1e-118  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  69.82 
 
 
293 aa  422  1e-117  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  69.69 
 
 
292 aa  422  1e-117  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  68.99 
 
 
293 aa  423  1e-117  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  68.99 
 
 
292 aa  418  1e-116  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  69.93 
 
 
291 aa  421  1e-116  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  69.69 
 
 
292 aa  420  1e-116  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  70.03 
 
 
290 aa  416  9.999999999999999e-116  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
297 aa  415  9.999999999999999e-116  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
293 aa  414  9.999999999999999e-116  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  68.99 
 
 
292 aa  417  9.999999999999999e-116  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  66.9 
 
 
292 aa  411  1e-114  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  66.43 
 
 
295 aa  413  1e-114  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1998  glucose-1-phosphate thymidylyltransferase  67.59 
 
 
299 aa  411  1e-114  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00000687148  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  65.84 
 
 
297 aa  411  1e-114  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  68.53 
 
 
307 aa  409  1e-113  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_007512  Plut_0416  glucose-1-phosphate thymidylyltransferase, long form  68.75 
 
 
292 aa  409  1e-113  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0512  glucose-1-phosphate thymidylyltransferase, long form  67.59 
 
 
295 aa  409  1e-113  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  66.19 
 
 
312 aa  407  1e-113  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
297 aa  408  1e-113  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
297 aa  409  1e-113  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
292 aa  409  1e-113  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
297 aa  410  1e-113  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
293 aa  407  1e-113  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
297 aa  409  1e-113  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
305 aa  408  1e-113  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
296 aa  405  1.0000000000000001e-112  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  65.14 
 
 
297 aa  407  1.0000000000000001e-112  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_011060  Ppha_2300  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
293 aa  406  1.0000000000000001e-112  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.390759  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
293 aa  406  1.0000000000000001e-112  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
292 aa  404  1.0000000000000001e-112  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
305 aa  406  1.0000000000000001e-112  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
292 aa  405  1.0000000000000001e-112  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_008347  Mmar10_2458  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
291 aa  405  1.0000000000000001e-112  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
293 aa  406  1.0000000000000001e-112  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  68.31 
 
 
293 aa  407  1.0000000000000001e-112  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_002950  PG1563  glucose-1-phosphate thymidylyltransferase  68.31 
 
 
289 aa  401  1e-111  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010803  Clim_1781  glucose-1-phosphate thymidylyltransferase  65.28 
 
 
298 aa  400  1e-111  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000367124  n/a   
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  65.48 
 
 
312 aa  403  1e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  64.44 
 
 
297 aa  401  1e-111  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
293 aa  402  1e-111  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  65.14 
 
 
297 aa  403  1e-111  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  65.48 
 
 
297 aa  403  1e-111  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  65.96 
 
 
302 aa  402  1e-111  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  66.55 
 
 
295 aa  402  1e-111  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
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