Gene Dd703_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3286 
Symbol 
ID8089232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3850074 
End bp3850940 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID644837358 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_002988870 
Protein GI242240689 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA TTATCCTGGC CGGAGGCTCC GGCACCCGCC TGTATCCCAT AACTCTGGCT 
ATCTCAAAAC AGCTGATACC GATCTATAAC AAACCCATGA TTTATTACCC GCTGTCTACG
CTGATGCTGG CGGGTATTCG CGAAATACTG ATCATTACAA CGCCCGAAGA CAACCAAAAC
TTCCGCCGCC TGCTGGGCGA CGGTAGCCAA TTTGGCATTC ATATCGACTA TGCCATCCAA
CCCAGCCCCG ATGGCCTGGC CCAGGCGTTT ATCATTGGTG AAGAATTCAT CGGCAACGAC
AGTTGCTGCC TGGTGTTGGG AGACAATATT TTTTATGGGC AATCCTTTGG TAATACATTA
AGGAAAACAG CGCAAAAGAC AGCTGGCGCC ACAATCTTTG GTTATCAGGT TAAAGACCCT
GAACGTTTCG GCGTGGTCGA ATTCGATGCG AACATGAATG CCGTATCCAT TGAAGAAAAA
CCCGCATCAC CCAAATCGAA CTATGCGGTA ACAGGCCTTT ATTTCTATGA CAACAGAGTC
ATCGACTTGG CCAAGCAGGT AAAACCCTCA CATCGCGGCG AACTCGAAAT CACCACCATT
AACCAAATGT ACCTGGAGGA TGGTTTACTC AGCGTCGAAT TACTCGGCCG CGGGTTCGCT
TGGCTCGACA CGGGAACCCA TGAAAGCCTG CATCAGGCCT CCTCATTTGT ACAAACAATA
GAACATGTGC AAGGCATGAA AGTGGCCTGC CTTGAGGAAA TTGCCTGGCG TAATGGATGG
CTGACCAAGC AGGAACTCAC GACACTGGCC CACCCCATGT TAAAAAACGA ATACGGCCAA
TATTTGATGA ATTTACTTCG GCAGTAA
 
Protein sequence
MKGIILAGGS GTRLYPITLA ISKQLIPIYN KPMIYYPLST LMLAGIREIL IITTPEDNQN 
FRRLLGDGSQ FGIHIDYAIQ PSPDGLAQAF IIGEEFIGND SCCLVLGDNI FYGQSFGNTL
RKTAQKTAGA TIFGYQVKDP ERFGVVEFDA NMNAVSIEEK PASPKSNYAV TGLYFYDNRV
IDLAKQVKPS HRGELEITTI NQMYLEDGLL SVELLGRGFA WLDTGTHESL HQASSFVQTI
EHVQGMKVAC LEEIAWRNGW LTKQELTTLA HPMLKNEYGQ YLMNLLRQ