Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0187 |
Symbol | rfbA |
ID | 5385297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 211896 |
End bp | 212777 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863149 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001399184 |
Protein GI | 153948584 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA TAATTCTGGC TGGTGGTTCA GGTTCCCGAT TACACCCCAT CACCCGTGGC GTCTCTAAGC AACTGCTTCC CATCTACGAT AAACCCATGA TCTATTACCC GCTGTCAGTA TTGATGCTGG CAGGGATCCG TGACGTGTTG ATTATCTCAA CCCCGGAAGA CTTGCCGTCG TTTCAGCGTT TGCTGGGCAA TGGTGATGAG TTTGGTATTA ATCTGAGTTA TGCCGCACAG CCTAGCCCAG ACGGGCTGGC ACAGGCATTT ATCATTGGTG AAGCGTTTAT TGATAATGAG CCATGCTGTT TGGTACTCGG TGATAATATC TACTTCGGCC AAGGCTTTAG TCCAAAACTG AAAGCCGTCG CCGCGCGTCA GCAGGGCGCG ACTGTTTTCG GCTATCAGGT GATGGATCCA GAGCGCTTTG GCGTAGTGGA GTTTGATGAC AACTTCCGCG CGTTGTCTAT TGAAGAAAAA CCGAGCCAGC CAAAATCAAA TTGGGCGGTG ACCGGGCTCT ATTTCTACGA TAACCAAGTG GTTGATTTTG CCAAGCAGGT TAAACCTTCT GCTCGCGGTG AACTGGAAAT TACCAGCATT AATCAAATGT ATCTGGATCG CGGTGAGTTA ACGGTTGAGC TGCTAGGGCG TGGTTTTGCC TGGCTGGATA CCGGTACCCA TGACAGCCTG ATCGAAGCCA GTACTTTTGT TCAAACGGTT GAAAAACGTC AAGGTTTTAA AATTGCTTGT TTGGAAGAGA TTGCCTGGCG TAACGGTTGG TTGGATGATG ATGGCGTAAA ACGTGCGGCA ACCGCGCTGG CGAAAACCGG TTATGGCAAA TATCTGTTGG ATCTATTACA TGCCCGTCCA CGCCAGTATT GA
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Protein sequence | MKGIILAGGS GSRLHPITRG VSKQLLPIYD KPMIYYPLSV LMLAGIRDVL IISTPEDLPS FQRLLGNGDE FGINLSYAAQ PSPDGLAQAF IIGEAFIDNE PCCLVLGDNI YFGQGFSPKL KAVAARQQGA TVFGYQVMDP ERFGVVEFDD NFRALSIEEK PSQPKSNWAV TGLYFYDNQV VDFAKQVKPS ARGELEITSI NQMYLDRGEL TVELLGRGFA WLDTGTHDSL IEASTFVQTV EKRQGFKIAC LEEIAWRNGW LDDDGVKRAA TALAKTGYGK YLLDLLHARP RQY
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