| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_B0048 |
|---|
| Symbol | |
|---|
| ID | 3833379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007641 |
|---|
| Strand | - |
|---|
| Start bp | 50713 |
|---|
| End bp | 51597 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637824067 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_425084 |
|---|
| Protein GI | 83582778 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.231271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAA TTATTCTGGC CGGGGGGTCT GGTACGCGTC TCTATCCGAT GACGCATGCC
GTCTGTAAGC AGCTTCTGCC AATCTATAAC AAACCAATGA TCTATTATCC TTTGGCTGTT
CTGATGATGG CGGGAATTCG CGATGTCCTG ATCATTTCAA CGCCCACCGA CCTTCCGCGT
TTTATCGAAA TGTTGAAAGA CGGTAGCCAA TGGGGCCTGA ACCTCTCCTA TGCGGAGCAA
GCCGAGCCTC GAGGACTGGC CGAGGCCTTC CTGATTGGTG CGGACTTCGT TGGCGGGGAG
CCTTGTGCGC TGGTTCTCGG GGATAACATT TTTCATGGCC ACGACCTGCC GATGATATTG
CGGCGGGCCG CTGCACGGAC CTCCGGAGCG ACGGTATTTG GTTATCATGT CCAAGATCCG
GAACGTTACG GCGTTGTGGA CTTTGATAGT GATGGAAATG CTCTTTCCAT TGAAGAAAAG
CCAAAAAACC CAAAGTCAAA CTATGCGGTC ACTGGTCTGT ATTTCTATGA TGATAAAGTT
GTAGATTATG CCAGGGACGT TAAGCCCTCG CCACGCGGTG AGTTGGAAAT AACAGATATT
AATAATATGT ATCTAAAAGA AAAAAGCCTT CGCGTCGAAG TCATGGGAAG AGGCTTCGCT
TGGCTTGATA CGGGAACGTA TGACAGCCTG CTTGAGGCCG CGACTTTTGT CCGAACGGTG
GAAAGCCGTC AGGGTCTCAT GGTGGCATGC CCCGAGGAAA TTTCCTGGAG ATTAGGCTAT
ATCAGCGATG ATCAGCTTGA AAAGCTGACC TATAATTTAC GTAAAACATC TTATGGACAA
TATTTATTGC AAGTTCTGAA AACAGAAAAG GGGCATATTT CTTAA
|
|---|
| Protein sequence | MKGIILAGGS GTRLYPMTHA VCKQLLPIYN KPMIYYPLAV LMMAGIRDVL IISTPTDLPR
FIEMLKDGSQ WGLNLSYAEQ AEPRGLAEAF LIGADFVGGE PCALVLGDNI FHGHDLPMIL
RRAAARTSGA TVFGYHVQDP ERYGVVDFDS DGNALSIEEK PKNPKSNYAV TGLYFYDDKV
VDYARDVKPS PRGELEITDI NNMYLKEKSL RVEVMGRGFA WLDTGTYDSL LEAATFVRTV
ESRQGLMVAC PEEISWRLGY ISDDQLEKLT YNLRKTSYGQ YLLQVLKTEK GHIS
|
|---|
| |