Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1914 |
Symbol | |
ID | 6375606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2078329 |
End bp | 2079225 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684410 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001960311 |
Protein GI | 189500841 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00943889 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGGGA TTATACTGGC GGGAGGATCT GGAACGCGGT TGTATCCGGC GACAAAGGGG ATATCGAAAC AGTTGCTGCC GATATACGAC AAACCGATGA TTTACTATCC TTTGAGCACG CTGATGCTGG CGGGGATACG TGAAGTGCTG GTGATATCGA CACCAGATGA TCTTCCGTTA TTTCGAAAAG TGCTTGGAAA TGGGTGTGAC TGGGGGATCA ATCTGTCCTA TGTCGAACAG CCTTCACCGG ACGGGTTGGC ACAGGCCTTT CTTCTGGGCG AAGAGTTTAT CGGAGATGAC GATGTCTGTC TGATCCTTGG GGACAATATT TTTTTCGGTT ACGGGTTTAC GGGAATGTTG CAGAGGGCGG TGCAAAGCGT CAGCGAAGAT CGTGCGGCCA ATATCTTCGG TTATTATGTG AACGATCCTG AGCGATACGG CGTGGCGGAA TTCGATGAAG CGGGTAACGT CCTCTCTATA GAGGAGAAGC CCTCTGAGCC GAAGTCGAAT TATGCTGTTG TGGGATTGTA TTTCTATACG AACGATGTCG TCGATGTTGC CAAAAACGTG AAGCCTTCAG CAAGGGGTGA GCTTGAGATT ACCTCGGTGA ACGAGGAATA TCTGAGAAGG GAGCAACTGA AGATGTCTAT CATGGGTCGC GGGTTCGCAT GGCTGGATAC AGGGACGCAC GAGTCGTTTC AGGAGGCAGG TAACTTTATC GAGACAGTCG AGAAGAGGCA GGGTCTGAAA ATAGCCTGTC CCGAGGAGAT TGCATGGCGC AACAAATGGA TCGACGACTC CCGTCTCGAA CAACTCGCCG CACCTCTGAT GAAAAGCCAG TATGGAGAGT ATTTGAAAGG TCTTCTTAGC CACAAGCAAG AGCTTTTACA TGTTTAA
|
Protein sequence | MKGIILAGGS GTRLYPATKG ISKQLLPIYD KPMIYYPLST LMLAGIREVL VISTPDDLPL FRKVLGNGCD WGINLSYVEQ PSPDGLAQAF LLGEEFIGDD DVCLILGDNI FFGYGFTGML QRAVQSVSED RAANIFGYYV NDPERYGVAE FDEAGNVLSI EEKPSEPKSN YAVVGLYFYT NDVVDVAKNV KPSARGELEI TSVNEEYLRR EQLKMSIMGR GFAWLDTGTH ESFQEAGNFI ETVEKRQGLK IACPEEIAWR NKWIDDSRLE QLAAPLMKSQ YGEYLKGLLS HKQELLHV
|
| |