Gene Cphamn1_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1914 
Symbol 
ID6375606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2078329 
End bp2079225 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID642684410 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001960311 
Protein GI189500841 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00943889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGGGA TTATACTGGC GGGAGGATCT GGAACGCGGT TGTATCCGGC GACAAAGGGG 
ATATCGAAAC AGTTGCTGCC GATATACGAC AAACCGATGA TTTACTATCC TTTGAGCACG
CTGATGCTGG CGGGGATACG TGAAGTGCTG GTGATATCGA CACCAGATGA TCTTCCGTTA
TTTCGAAAAG TGCTTGGAAA TGGGTGTGAC TGGGGGATCA ATCTGTCCTA TGTCGAACAG
CCTTCACCGG ACGGGTTGGC ACAGGCCTTT CTTCTGGGCG AAGAGTTTAT CGGAGATGAC
GATGTCTGTC TGATCCTTGG GGACAATATT TTTTTCGGTT ACGGGTTTAC GGGAATGTTG
CAGAGGGCGG TGCAAAGCGT CAGCGAAGAT CGTGCGGCCA ATATCTTCGG TTATTATGTG
AACGATCCTG AGCGATACGG CGTGGCGGAA TTCGATGAAG CGGGTAACGT CCTCTCTATA
GAGGAGAAGC CCTCTGAGCC GAAGTCGAAT TATGCTGTTG TGGGATTGTA TTTCTATACG
AACGATGTCG TCGATGTTGC CAAAAACGTG AAGCCTTCAG CAAGGGGTGA GCTTGAGATT
ACCTCGGTGA ACGAGGAATA TCTGAGAAGG GAGCAACTGA AGATGTCTAT CATGGGTCGC
GGGTTCGCAT GGCTGGATAC AGGGACGCAC GAGTCGTTTC AGGAGGCAGG TAACTTTATC
GAGACAGTCG AGAAGAGGCA GGGTCTGAAA ATAGCCTGTC CCGAGGAGAT TGCATGGCGC
AACAAATGGA TCGACGACTC CCGTCTCGAA CAACTCGCCG CACCTCTGAT GAAAAGCCAG
TATGGAGAGT ATTTGAAAGG TCTTCTTAGC CACAAGCAAG AGCTTTTACA TGTTTAA
 
Protein sequence
MKGIILAGGS GTRLYPATKG ISKQLLPIYD KPMIYYPLST LMLAGIREVL VISTPDDLPL 
FRKVLGNGCD WGINLSYVEQ PSPDGLAQAF LLGEEFIGDD DVCLILGDNI FFGYGFTGML
QRAVQSVSED RAANIFGYYV NDPERYGVAE FDEAGNVLSI EEKPSEPKSN YAVVGLYFYT
NDVVDVAKNV KPSARGELEI TSVNEEYLRR EQLKMSIMGR GFAWLDTGTH ESFQEAGNFI
ETVEKRQGLK IACPEEIAWR NKWIDDSRLE QLAAPLMKSQ YGEYLKGLLS HKQELLHV