Gene Cpha266_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1998 
Symbol 
ID4570826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp2312809 
End bp2313708 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content48% 
IMG OID639766580 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_912435 
Protein GI119357791 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000687148 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAA TAATTCTTGC CGGCGGTTCA GGGACACGCC TTTATCCGAT AACGAGGGGT 
ATTTCAAAAC AGCTTCTGCC GGTATACGAC AAACCCATGA TTTATTATCC CCTCAGTACC
TTGATGCTGG GGGGAATCAA TGATATCCTT ATTATTTCAA CACCCGAAGA TCTGCCTTTG
TTTCAGCGTC TGCTGGGAGA TGGCAGCGGT TGGGGAATAT CGCTTTCCTA CAAGGCTCAA
CCATCGCCTG ACGGGCTGGC GCAGGCTTTT ATTCTTGGTG AAGCGTTTAT CGGTTCGGAT
TCGGTTTGTC TGATTCTCGG CGATAACATT TTTTTTGGAT ATGGTTTCAG TTCCATGCTT
GATGATGCGG TGAGGATCGT TGAGGAAGAG GCCAAGGCAA CCATTTTTGG CTACTATGTC
CGTGATCCTG AGCGGTATGG CGTGGCGGAA TTTGATGAAT CCGGCCAGGT GATCTCTCTT
GAAGAGAAGC CTCTGGCTCC CAAATCGAAT TATGCCGTTG TCGGGCTCTA TTTTTATGAC
AATTCCGTTG TTGAGATTGC AAAAACCATT AAACCTTCTG ATAGAGGCGA GCTCGAGATC
ACGTCGGTGA ATGAAGAGTA TCTGAAACGA CGGAAGCTTC GTCTTTCAAT TCTCGGGCGA
GGTTTTGCCT GGCTTGATAC CGGTACGCAC GACTCTTATC AGGAAGCCGG TCACTTTATC
GAGACGGTGG AAAAAAGACA GGGACTGAAG ATTGCATGCC CTGAAGAAAT TGCATGGCGA
AAAGGATGGA TCGACGATCG GCAGCTCAGG GAACTTGCCG CTCCGCTTCT GAAAAATCAG
TACGGAGCCT ATCTTGTTGA ACTGCTTGAT CGCAAGGACG AGTATACCCG GCACCATTGA
 
Protein sequence
MKGIILAGGS GTRLYPITRG ISKQLLPVYD KPMIYYPLST LMLGGINDIL IISTPEDLPL 
FQRLLGDGSG WGISLSYKAQ PSPDGLAQAF ILGEAFIGSD SVCLILGDNI FFGYGFSSML
DDAVRIVEEE AKATIFGYYV RDPERYGVAE FDESGQVISL EEKPLAPKSN YAVVGLYFYD
NSVVEIAKTI KPSDRGELEI TSVNEEYLKR RKLRLSILGR GFAWLDTGTH DSYQEAGHFI
ETVEKRQGLK IACPEEIAWR KGWIDDRQLR ELAAPLLKNQ YGAYLVELLD RKDEYTRHH