| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2130 |
|---|
| Symbol | |
|---|
| ID | 8368591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2548948 |
|---|
| End bp | 2549829 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644984584 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_003142235 |
|---|
| Protein GI | 256820956 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA TTATATTAGC AGGCGGTTCA GGTACACGCC TTTACCCCAT TACTAAGGGA
GTTTCTAAAC AATTGCTCCC TATTTACGAT AAACCAATGA TTTACTACCC ATTATCGGTG
CTGATGCTTT CGGGTATTCG CGAGGTATTG GTAATTTCTA CTCCTCAGGA CTTACCAGGT
TTTGAGCGCC TCTTAGGTGA CGGTTCCGAC TTCGGCATTC GCCTTAGCTA TGCCGAGCAA
CCCAGTCCCG ATGGCTTGGC TCAAGCTTTT ATCATAGGCG AAGAGTTTAT AGGCGATGAC
GATGTGTGCC TGGTATTAGG AGATAATATT TTCTACGGAC AGAGTTTCTC GAAAATGCTC
GCTCAAGCGG TAGAGAATGT AAAGAAAGAA CACAAAGCTA CTGTCTTTGG TTATTACGTA
AAAGACCCTG AACGTTATGG AGTAGCTGAG TTTGACACCG CGGGTAATGT GCTTAGCATT
GAGGAAAAAC CCACACAGCC TAAATCTAAC TATGCCGTAG TAGGACTCTA TTTTTACCCC
AATAAAGTAG TGAAAGTAGC CAAAAGTATC AAACCCTCAG CACGAGGTGA ATTGGAGATT
ACTACGGTGA ATCAAGAGTT TCTAAACGAC GGCGAATTAA AAGTACAACT TTTAGGGCGC
GGTTTTGCGT GGCTTGATAC GGGTACTCAC GATTCACTTA GCGAAGCATC AAACTTCGTA
GAAACCTTAG AGAAACGTCA AGGACTCAAA ATCTCTTGTT TGGAAGAAAT AGCCTATCGT
AAAGGTTGGA TTACTGCTGA AAAGTTGCAA GAGTTAGCAA AACCAATGCT CAAAAACCAA
TACGGGCAAT ATCTTTTGCA ATTAACGATG AACAATAGAT AA
|
|---|
| Protein sequence | MKGIILAGGS GTRLYPITKG VSKQLLPIYD KPMIYYPLSV LMLSGIREVL VISTPQDLPG
FERLLGDGSD FGIRLSYAEQ PSPDGLAQAF IIGEEFIGDD DVCLVLGDNI FYGQSFSKML
AQAVENVKKE HKATVFGYYV KDPERYGVAE FDTAGNVLSI EEKPTQPKSN YAVVGLYFYP
NKVVKVAKSI KPSARGELEI TTVNQEFLND GELKVQLLGR GFAWLDTGTH DSLSEASNFV
ETLEKRQGLK ISCLEEIAYR KGWITAEKLQ ELAKPMLKNQ YGQYLLQLTM NNR
|
|---|
| |