| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3186 |
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| Symbol | rfbA |
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| ID | 1170880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3324543 |
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| End bp | 3325457 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637345003 |
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| Product | glucose-1-phosphate-thymidylyltransferase |
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| Protein accession | NP_718742 |
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| Protein GI | 24374699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA ACACTCAACA CTCAACACTT AAAACTCATA ATACCAAGGG TATTATTCTC
GCTGGTGGCT CTGGTACGCG TTTATATCCC ATTACTAAAG GCGTATCTAA GCAATTATTG
CCTGTCTACG ACAAGCCAAT GATTTACTAC CCTATTTCAG TACTAATGCT TGCAGGTATC
CGAGATATTC TGATTATTAC TACGCCAGAG GATCAATCTT CTTTTCAACG TCTTCTCGGT
GACGGTAGTG ACTTTGGTAT CAGTTTGCAA TATGCAGTTC AAGTAACACC AGATGGCTTA
GCGCAAGCTT TTATTATCGG TGAAGAGTTT ATCGGCAATG ATAATGTGTG TTTAGCACTT
GGAGATAATA TCTTTTGGGG CCAAGGTTTT TCACCAATAC TCAAAAAAGC CGCCGCAAGA
CCGACCGGTG CATCTGTATT TGGTTATCAA GTTAAAGATC CTGAACGTTT TGGTGTGGTG
GAATTCGATC AAGATCTAAA AGCTATTTCG ATTGAAGAAA AACCCCTAAA ACCTAAATCT
AATTTTGCGG TTACAGGCCT ATATTTTTAC GATAACCGAG TTGTGAATAT CGCTAAAAAT
GTCAAACCCT CAGAGCGCGG TGAGTTAGAA ATCACCAGTA TTAATCAAGC CTATCTTGAA
ATGGGGAAGT TAAATGTTGA GCTACTAGGT CGTGGTTTTG CTTGGTTAGA TACTGGTACC
TATGAGAGTC TGTTAGAAGC CGCATCATTT GTTGAAACGA TCGAAAAAAG ACAGGGCTAT
AAGATAGCTT GTTTAGAGGA AATTGCATGG CGTAATCATT GGCTAAGTAA TGAGCAAATA
CTTAAAGTTG CAAATGAAAT GTCTAAGAAT AGTTATGGAC AATATTTATT AGGTTTAGTC
GAGATTAAAA AATGA
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| Protein sequence | MELNTQHSTL KTHNTKGIIL AGGSGTRLYP ITKGVSKQLL PVYDKPMIYY PISVLMLAGI
RDILIITTPE DQSSFQRLLG DGSDFGISLQ YAVQVTPDGL AQAFIIGEEF IGNDNVCLAL
GDNIFWGQGF SPILKKAAAR PTGASVFGYQ VKDPERFGVV EFDQDLKAIS IEEKPLKPKS
NFAVTGLYFY DNRVVNIAKN VKPSERGELE ITSINQAYLE MGKLNVELLG RGFAWLDTGT
YESLLEAASF VETIEKRQGY KIACLEEIAW RNHWLSNEQI LKVANEMSKN SYGQYLLGLV
EIKK
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