More than 300 homologs were found in PanDaTox collection
for query gene Phep_4022 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  100 
 
 
286 aa  581  1.0000000000000001e-165  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  81.82 
 
 
286 aa  489  1e-137  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  80.35 
 
 
288 aa  488  1e-137  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  81.56 
 
 
291 aa  487  1e-136  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_008255  CHU_3390  glucose-1-phosphate thymidylyltransferase  75.87 
 
 
288 aa  468  1.0000000000000001e-131  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.105005 
 
 
-
 
NC_013132  Cpin_0181  glucose-1-phosphate thymidylyltransferase  74.13 
 
 
289 aa  449  1e-125  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_13103  glucose-1-phosphate thymidylyltransferase  71.33 
 
 
286 aa  436  1e-121  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2349  glucose-1-phosphate thymidylyltransferase  69.12 
 
 
290 aa  419  1e-116  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0181385  hitchhiker  0.00000600969 
 
 
-
 
NC_013521  Sked_09040  Glucose-1-phosphate thymidylyltransferase  69.47 
 
 
292 aa  416  9.999999999999999e-116  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00724889  normal  0.162392 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  66.08 
 
 
292 aa  405  1.0000000000000001e-112  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1190  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
294 aa  405  1.0000000000000001e-112  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal  0.0390929 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
292 aa  401  1e-111  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
292 aa  401  1e-111  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2557  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
287 aa  402  1e-111  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0967265  n/a   
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
293 aa  397  9.999999999999999e-111  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_011094  SeSA_A2328  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
294 aa  397  9.999999999999999e-111  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.196545 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  64.69 
 
 
293 aa  400  9.999999999999999e-111  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
305 aa  397  9.999999999999999e-111  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2330  glucose-1-phosphate thymidylyltransferase  65.38 
 
 
292 aa  399  9.999999999999999e-111  Escherichia coli E24377A  Bacteria  normal  0.0550352  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
294 aa  398  9.999999999999999e-111  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  63.64 
 
 
294 aa  394  1e-109  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
NC_009565  TBFG_10339  alpha-D-glucose-1-phosphate thymidylyltransferase rmlA  65.38 
 
 
288 aa  394  1e-109  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
292 aa  397  1e-109  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  66.9 
 
 
296 aa  395  1e-109  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  63.99 
 
 
294 aa  396  1e-109  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_011080  SNSL254_A2277  glucose-1-phosphate thymidylyltransferase  63.64 
 
 
294 aa  395  1e-109  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000187637 
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  67.96 
 
 
293 aa  394  1e-109  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_013757  Gobs_4306  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
290 aa  393  1e-108  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.204948  n/a   
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  64.69 
 
 
289 aa  394  1e-108  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2410  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
290 aa  392  1e-108  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.140851 
 
 
-
 
NC_009511  Swit_4021  glucose-1-phosphate thymidylyltransferase  64.89 
 
 
289 aa  393  1e-108  Sphingomonas wittichii RW1  Bacteria  normal  0.401685  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
290 aa  391  1e-108  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_008532  STER_1224  glucose-1-phosphate thymidyl transferase  65.03 
 
 
289 aa  392  1e-108  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2688  glucose-1-phosphate thymidylyltransferase  63.99 
 
 
287 aa  394  1e-108  Arthrobacter sp. FB24  Bacteria  normal  0.0105243  n/a   
 
 
-
 
NC_008726  Mvan_0603  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
287 aa  394  1e-108  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0423586  normal 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  65.61 
 
 
293 aa  390  1e-107  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  65.38 
 
 
293 aa  389  1e-107  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  65.38 
 
 
307 aa  387  1e-107  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
296 aa  389  1e-107  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_013441  Gbro_0596  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
291 aa  389  1e-107  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  65.03 
 
 
292 aa  389  1e-107  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
287 aa  389  1e-107  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0123  glucose-1-phosphate thymidylyltransferase  64.79 
 
 
291 aa  389  1e-107  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
293 aa  386  1e-106  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3295  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
289 aa  385  1e-106  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.092975  normal  0.141997 
 
 
-
 
NC_007005  Psyr_0924  glucose-1-phosphate thymidylyltransferase, long form  64.69 
 
 
293 aa  386  1e-106  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.390731 
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  63.64 
 
 
296 aa  387  1e-106  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_009338  Mflv_0285  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
287 aa  384  1e-106  Mycobacterium gilvum PYR-GCK  Bacteria  hitchhiker  0.00700603  normal  0.320822 
 
 
-
 
NC_011989  Avi_1494  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
287 aa  387  1e-106  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1983  glucose-1-phosphate thymidylyltransferase  65.73 
 
 
287 aa  386  1e-106  Agrobacterium vitis S4  Bacteria  normal  0.967411  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  63.64 
 
 
296 aa  387  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
293 aa  385  1e-106  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  62.94 
 
 
305 aa  384  1e-106  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_013173  Dbac_3118  glucose-1-phosphate thymidylyltransferase  65.6 
 
 
290 aa  387  1e-106  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
293 aa  387  1e-106  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
290 aa  386  1e-106  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  387  1e-106  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
293 aa  387  1e-106  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
291 aa  385  1e-106  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3556  glucose-1-phosphate thymidylyltransferase  65.85 
 
 
294 aa  384  1e-105  Xanthobacter autotrophicus Py2  Bacteria  normal  0.305082  normal  0.867096 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
296 aa  382  1e-105  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
312 aa  383  1e-105  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
292 aa  382  1e-105  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0055  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
290 aa  384  1e-105  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0829752  n/a   
 
 
-
 
NC_013093  Amir_6654  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
292 aa  383  1e-105  Actinosynnema mirum DSM 43827  Bacteria  normal  0.147178  n/a   
 
 
-
 
NC_008146  Mmcs_0436  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
287 aa  383  1e-105  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  65.14 
 
 
297 aa  383  1e-105  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
296 aa  383  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0696  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
294 aa  382  1e-105  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.53714  normal 
 
 
-
 
NC_008705  Mkms_0446  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
287 aa  383  1e-105  Mycobacterium sp. KMS  Bacteria  normal  hitchhiker  0.00521605 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
299 aa  380  1e-104  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
296 aa  379  1e-104  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
296 aa  380  1e-104  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  62.24 
 
 
294 aa  379  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_012892  B21_01934  hypothetical protein  66.17 
 
 
270 aa  380  1e-104  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1011  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
292 aa  377  1e-104  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0423  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
287 aa  380  1e-104  Mycobacterium sp. JLS  Bacteria  normal  0.0590699  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
298 aa  380  1e-104  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
289 aa  379  1e-104  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
298 aa  378  1e-104  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
289 aa  380  1e-104  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
298 aa  380  1e-104  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  62.46 
 
 
305 aa  380  1e-104  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_009901  Spea_1399  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
290 aa  375  1e-103  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0403  glucose-1-phosphate thymidylyltransferase  61.19 
 
 
303 aa  375  1e-103  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.504553 
 
 
-
 
NC_013173  Dbac_2558  glucose-1-phosphate thymidylyltransferase  61.54 
 
 
295 aa  375  1e-103  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  61.19 
 
 
310 aa  376  1e-103  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  61.67 
 
 
292 aa  376  1e-103  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
301 aa  376  1e-103  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  62.59 
 
 
292 aa  376  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_013131  Caci_8194  glucose-1-phosphate thymidylyltransferase  61.4 
 
 
289 aa  374  1e-103  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0479  glucose-1-phosphate thymidylyltransferase  60.28 
 
 
293 aa  375  1e-103  Clostridium perfringens ATCC 13124  Bacteria  normal  0.778561  n/a   
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  62.24 
 
 
293 aa  375  1e-103  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_012850  Rleg_1270  glucose-1-phosphate thymidylyltransferase  62.81 
 
 
289 aa  376  1e-103  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.106852  normal  0.0645307 
 
 
-
 
NC_013223  Dret_0153  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
358 aa  377  1e-103  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.34957 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  60.84 
 
 
304 aa  372  1e-102  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_0774  glucose-1-phosphate thymidylyltransferase, long form  63.64 
 
 
292 aa  374  1e-102  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4186  glucose-1-phosphate thymidylyltransferase  61.32 
 
 
293 aa  371  1e-102  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  61.05 
 
 
297 aa  371  1e-102  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4164  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
291 aa  372  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.375509  normal  0.0599581 
 
 
-
 
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