More than 300 homologs were found in PanDaTox collection
for query gene Sama_2240 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  100 
 
 
305 aa  627  1e-178  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  71.58 
 
 
292 aa  437  1e-121  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1214  glucose-1-phosphate thymidylyltransferase  70.42 
 
 
296 aa  431  1e-120  Psychrobacter arcticus 273-4  Bacteria  normal  0.942362  decreased coverage  0.00289209 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  70.88 
 
 
290 aa  431  1e-120  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  66.67 
 
 
304 aa  424  1e-117  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4056  glucose-1-phosphate thymidylyltransferase  67.35 
 
 
296 aa  423  1e-117  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.340468 
 
 
-
 
NC_009512  Pput_3933  glucose-1-phosphate thymidylyltransferase  67.7 
 
 
296 aa  422  1e-117  Pseudomonas putida F1  Bacteria  normal  0.527502  normal  0.192647 
 
 
-
 
NC_004578  PSPTO_1079  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
296 aa  420  1e-116  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.857116  n/a   
 
 
-
 
NC_007492  Pfl01_0702  glucose-1-phosphate thymidylyltransferase  68.86 
 
 
307 aa  419  1e-116  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00504967  normal 
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
297 aa  418  1e-116  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0838  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
293 aa  419  1e-116  Marinomonas sp. MWYL1  Bacteria  normal  0.22071  normal 
 
 
-
 
NC_009439  Pmen_4290  glucose-1-phosphate thymidylyltransferase  70.07 
 
 
290 aa  420  1e-116  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.314543 
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  67.6 
 
 
293 aa  414  9.999999999999999e-116  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1798  glucose-1-phosphate thymidylyltransferase  68.07 
 
 
287 aa  416  9.999999999999999e-116  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  67.36 
 
 
289 aa  414  1e-114  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
292 aa  411  1e-114  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
286 aa  409  1e-113  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  67.37 
 
 
295 aa  409  1e-113  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
293 aa  408  1e-113  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2652  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
291 aa  410  1e-113  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  65.86 
 
 
293 aa  409  1e-113  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
310 aa  410  1e-113  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  67.37 
 
 
293 aa  408  1e-113  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
289 aa  408  1e-113  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  65.85 
 
 
294 aa  409  1e-113  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  67.25 
 
 
289 aa  408  1e-113  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  67.61 
 
 
286 aa  409  1e-113  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  65.85 
 
 
294 aa  409  1e-113  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0684  glucose-1-phosphate thymidylyltransferase protein  65.96 
 
 
292 aa  406  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1382  glucose-1-phosphate thymidylyltransferase  65.4 
 
 
293 aa  406  1.0000000000000001e-112  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000585484 
 
 
-
 
NC_009800  EcHS_A2181  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
289 aa  407  1.0000000000000001e-112  Escherichia coli HS  Bacteria  normal  0.112189  n/a   
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  66.2 
 
 
291 aa  407  1.0000000000000001e-112  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0714  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
295 aa  402  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2858  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
289 aa  402  1e-111  Dickeya zeae Ech1591  Bacteria  normal  0.0450568  n/a   
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
312 aa  403  1e-111  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3016  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
289 aa  403  1e-111  Pectobacterium wasabiae WPP163  Bacteria  hitchhiker  0.00414881  n/a   
 
 
-
 
NC_007973  Rmet_2733  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
292 aa  404  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  65.26 
 
 
293 aa  401  1e-111  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  401  1e-111  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  65.49 
 
 
291 aa  401  1e-111  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
293 aa  403  1e-111  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
293 aa  404  1e-111  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
CP001509  ECD_01945  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
292 aa  399  9.999999999999999e-111  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  399  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
297 aa  399  9.999999999999999e-111  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007510  Bcep18194_A3970  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
297 aa  400  9.999999999999999e-111  Burkholderia sp. 383  Bacteria  hitchhiker  0.00629806  normal  0.592005 
 
 
-
 
NC_010501  PputW619_1395  glucose-1-phosphate thymidylyltransferase  63.57 
 
 
296 aa  398  9.999999999999999e-111  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3726  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
297 aa  399  9.999999999999999e-111  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
297 aa  399  9.999999999999999e-111  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
293 aa  398  9.999999999999999e-111  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
297 aa  399  9.999999999999999e-111  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0255  glucose-1-phosphate thymidylyltransferase  64.36 
 
 
309 aa  399  9.999999999999999e-111  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.201113  n/a   
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
293 aa  399  9.999999999999999e-111  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_011149  SeAg_B2220  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
294 aa  394  1e-109  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.281714  n/a   
 
 
-
 
NC_006348  BMA1989  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  396  1e-109  Burkholderia mallei ATCC 23344  Bacteria  normal  0.112346  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  64.46 
 
 
296 aa  397  1e-109  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  63.41 
 
 
297 aa  397  1e-109  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_007404  Tbd_1779  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  394  1e-109  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.149846  normal 
 
 
-
 
NC_007434  BURPS1710b_3162  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
312 aa  397  1e-109  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
291 aa  397  1e-109  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
NC_009080  BMA10247_1851  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia mallei NCTC 10247  Bacteria  normal  0.530858  n/a   
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  64.21 
 
 
297 aa  397  1e-109  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0924  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  63.51 
 
 
292 aa  394  1e-109  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  65.61 
 
 
293 aa  395  1e-109  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_009076  BURPS1106A_3140  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2754  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia mallei NCTC 10229  Bacteria  normal  0.119435  n/a   
 
 
-
 
NC_011663  Sbal223_1473  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
287 aa  395  1e-109  Shewanella baltica OS223  Bacteria  normal  0.905305  normal  0.376761 
 
 
-
 
NC_008321  Shewmr4_1319  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
291 aa  395  1e-109  Shewanella sp. MR-4  Bacteria  normal  normal  0.0322301 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  395  1e-109  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_010002  Daci_1277  glucose-1-phosphate thymidylyltransferase  62.98 
 
 
296 aa  395  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  64.81 
 
 
297 aa  395  1e-109  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68200  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  396  1e-109  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0399407 
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
293 aa  396  1e-109  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  65.16 
 
 
305 aa  396  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3103  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  397  1e-109  Burkholderia pseudomallei 668  Bacteria  normal  0.0791129  n/a   
 
 
-
 
NC_011205  SeD_A2435  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
294 aa  394  1e-109  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0000704371 
 
 
-
 
CP001637  EcDH1_1618  glucose-1-phosphate thymidylyltransferase  62.63 
 
 
293 aa  394  1e-108  Escherichia coli DH1  Bacteria  normal  0.0952229  n/a   
 
 
-
 
NC_004116  SAG1200  glucose-1-phosphate thymidylyltransferase  62.5 
 
 
289 aa  392  1e-108  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4290  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
294 aa  393  1e-108  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2130  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
288 aa  392  1e-108  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2009  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
292 aa  392  1e-108  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  63.86 
 
 
305 aa  392  1e-108  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_007951  Bxe_A3801  glucose-1-phosphate thymidylyltransferase  63.89 
 
 
292 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  0.636815  normal 
 
 
-
 
NC_007952  Bxe_B1715  glucose-1-phosphate thymidylyltransferase  64.11 
 
 
297 aa  394  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.703429 
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
292 aa  393  1e-108  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2321  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
294 aa  394  1e-108  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  decreased coverage  0.00736153 
 
 
-
 
NC_008391  Bamb_3386  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
298 aa  394  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  0.718729  normal 
 
 
-
 
NC_008527  LACR_0200  glucose-1-phosphate thymidylyltransferase  63.16 
 
 
289 aa  392  1e-108  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.310491  n/a   
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  62.81 
 
 
292 aa  392  1e-108  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_012791  Vapar_0754  glucose-1-phosphate thymidylyltransferase  63.79 
 
 
299 aa  391  1e-108  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6649  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
298 aa  393  1e-108  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6247  glucose-1-phosphate thymidylyltransferase  64.56 
 
 
298 aa  393  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0385422  normal  0.992107 
 
 
-
 
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