Gene Caci_8194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8194 
Symbol 
ID8339573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9505204 
End bp9506073 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID644961280 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_003118858 
Protein GI256397294 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGCA TCATCCTGGC CGGCGGGACC GGCTCACGGC TGTGGCCGAT CACCAAAGGC 
GTGTCCAAAC AGCTCATGCC GGTCTTCGAC AAGCCGATGA TCTACTACCC GCTGTCGACG
TTGGTGATGG CCGGCATCTA CGAGATCCTC GTCATCACCA CGCCCGAGGA CCAGGTGCAG
TTCCAGCGCC TGCTCGGCGA CGGGTCGCAG TGGGGTCTGG ACCTCACTTA CGTGGCGCAG
GAACGCCCCG ACGGGCTGGC TCAGGCCTTC ATCCTCGGCG AGGAGTTCAT CGCCGACGAG
TCCGTGGCGC TGGTGCTCGG CGACAACATC TTCCACGGCG TCGGGCTGGG CCGCCAGCTG
CGCACCCTCA ATTCCCCGGC CGGCGGCGTG GTCTTCGCCT ACCAGGTCGC GAACCCGCGC
GAGTACGGCG TGGTGGAGTT CGACGAAGCC GGCCGCGCCG TCTCGATCGA GGAGAAGCCG
GACAAGCCCA AGTCCCGCTT CGCCATCCCC GGTCTGTACT TCTACGACAA CCAGGTCGTG
GACATCGCCA AGAACCTCAC CCCGAGCGCG CGCGGCGAGC TGGAGATCAC CGGCGTCAAC
GTCGAATACC TGAACCGCGG CGAGCTGCAG GTGCAGGTTC TGGAGCGCGG CACAGCGTGG
CTGGACACCG GGACCTTCGA CTCCCTGGTG CAGGCCGCCG AATACGTCCG CGTCATAGAG
CAGCGGCAGG GCTACAAGGT CGGCTGCGTC GAGGAAGTGG CGTGGCGCTC CGGTTTCATC
ACCGACGCGC AGCTGGCCGA ACTCGCCGAG CCGTTGTGCA AGAGCGGCTA TGGCGAATAC
CTCCAGCACC TCCTCGACCC CGCGCTCTGA
 
Protein sequence
MRGIILAGGT GSRLWPITKG VSKQLMPVFD KPMIYYPLST LVMAGIYEIL VITTPEDQVQ 
FQRLLGDGSQ WGLDLTYVAQ ERPDGLAQAF ILGEEFIADE SVALVLGDNI FHGVGLGRQL
RTLNSPAGGV VFAYQVANPR EYGVVEFDEA GRAVSIEEKP DKPKSRFAIP GLYFYDNQVV
DIAKNLTPSA RGELEITGVN VEYLNRGELQ VQVLERGTAW LDTGTFDSLV QAAEYVRVIE
QRQGYKVGCV EEVAWRSGFI TDAQLAELAE PLCKSGYGEY LQHLLDPAL