Gene Mvan_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0603 
Symbol 
ID4646060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp644052 
End bp644915 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID639804104 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_951448 
Protein GI120401619 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0423586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCA TCATCCTGGC CGGCGGGTCG GGCACCCGGC TGTACCCGAT CACCCTCGGC 
ATCAGCAAAC AGCTGGTGCC GGTATACGAC AAACCGCTGG TCTACTACCC GCTGTCCACG
CTGATGATGG CGGGCATCCG CGACATCCTG GTGATCACCA CGGCGCACGA CGCCCCGGAC
TTCCGTCGGC TGCTGGGCGA CGGATCGGAT CTCGGGGTCA ACCTGAGCTA TGCCGTTCAG
GACGAGCCGG ACGGCCTCGC GCAGGCATTC GTGATCGGGG CATCGCACAT CGGCACCGAC
TCGGTGGCAC TGGTGTTGGG AGACAACATC TTCTACGGCC CCGGCCTGGG AACCAGTCTG
CAACGCTTTC AGAACGTCAG TGGCGGAGCG ATATTCGCAT ACTGGGTGGC GAACCCGTCA
GCCTACGGCG TGGTCGAGTT CGCCGAGGAC GGCACGGCGC TGTCGCTGGA GGAGAAGCCG
GCCACCCCGA AATCGCACTA TGCGGTGCCG GGGCTGTACT TCTACGACAA CGACGTCATC
GAGATCGCAC GCGGGCTGCG GAGATCGGCC CGCGGCGAAT ACGAGATCAC CGAGGTCAAC
CAGACCTACC TCAACCAGGG CCGGCTCAGT GTCGAAGTCC TGGCCAGGGG AACGGCATGG
CTGGACACCG GTACGTTCGA CTCCCTGCTG GATGCCGCCG ACTTCGTCAG GACCATAGAG
CGCAGGCAGG GACTCAAGAT CAGCGTGCCC GAAGAGGTGG CCTGGCGGGT GGGTTTCATC
GACGACGACG CGCTGGAGGC GCGGGCAAAA ACCCTGCTCA AGTCCGGTTA CGGGGCGTAT
CTGCTGGAGT TGCTGCAGCG CTGA
 
Protein sequence
MRGIILAGGS GTRLYPITLG ISKQLVPVYD KPLVYYPLST LMMAGIRDIL VITTAHDAPD 
FRRLLGDGSD LGVNLSYAVQ DEPDGLAQAF VIGASHIGTD SVALVLGDNI FYGPGLGTSL
QRFQNVSGGA IFAYWVANPS AYGVVEFAED GTALSLEEKP ATPKSHYAVP GLYFYDNDVI
EIARGLRRSA RGEYEITEVN QTYLNQGRLS VEVLARGTAW LDTGTFDSLL DAADFVRTIE
RRQGLKISVP EEVAWRVGFI DDDALEARAK TLLKSGYGAY LLELLQR