Gene PputGB1_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1382 
Symbol 
ID5869146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1545768 
End bp1546649 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content60% 
IMG OID641546485 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001667625 
Protein GI167032394 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000585484 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGCA AAGGCATCAT CCTGGCAGGT GGGTCGGGTA CCCGCTTGCA CCCCGCGACG 
CTGGCCATTT CCAAGCAACT GCTGCCGGTG TACGACAAGC CGATGATTTA CTACCCGCTG
ACCACATTGA TGCTGGCGGG TATTCACGAC ATCCTGATCA TCTCCACCCC CCAAGACACT
CCGCGCTTCG AGCAACTGCT GGGCAACGGC CACCGTTGGG GCATCAATAT CACCTACGCC
GTGCAGCCAT CCCCGGACGG CTTGGCCCAG GCGTTCCTGA TTGGCGAAGA CTTCATCGGC
AACGACCCCA CCGCACTGGT ACTCGGCGAC AACATCTATT ACGGCCACGA CTTCCAGCAA
CTGCTGCGCA GTGCCATGGA CCGCCGGGGC AGTGCCAGCG TGTTTGCCTA CCACGTGCAG
GACCCTGAAC GTTATGGTGT GGTCGAGTTC GACGGGCAGG GCAATGCGAT CAGCCTGGAA
GAGAAGCCGG CCCAGCCCAA GTCCAACTAT GCCGTGACCG GGTTGTACTT CTACGACAAC
GACGTGATCG AGATTGCCAA GGGCATTCGG CCGTCCACGC GTGGCGAGTT GGAGATTACC
GATGTGAACC GGGCTTACCT GGAGCAGCAC CGGTTGTCGG TGGAGATCAT GGGGCGCGGG
TATGCCTGGC TGGATACTGG GACGCATGAC TCGTTGCTGG AGGCTAGCGG GTATATCGCC
ACGATTGAAC GGCGGCAGGG GTTGAAGGTG GCTTGTCCGG AAGAGGTGGC TTACAGGCAG
GGGTGGATTG GGGCGGAGGA GTTGCTGAGG TTGGCTGAAC CGTTGGCCAA GAATGGGTAT
GGGCAGTATT TGAAGCGGTT GGTGGGGGAT AGGGTTTATT GA
 
Protein sequence
MKRKGIILAG GSGTRLHPAT LAISKQLLPV YDKPMIYYPL TTLMLAGIHD ILIISTPQDT 
PRFEQLLGNG HRWGINITYA VQPSPDGLAQ AFLIGEDFIG NDPTALVLGD NIYYGHDFQQ
LLRSAMDRRG SASVFAYHVQ DPERYGVVEF DGQGNAISLE EKPAQPKSNY AVTGLYFYDN
DVIEIAKGIR PSTRGELEIT DVNRAYLEQH RLSVEIMGRG YAWLDTGTHD SLLEASGYIA
TIERRQGLKV ACPEEVAYRQ GWIGAEELLR LAEPLAKNGY GQYLKRLVGD RVY