| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3390 |
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| Symbol | rfbA |
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| ID | 4186505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3871116 |
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| End bp | 3871982 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638073380 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_679969 |
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| Protein GI | 110639759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.105005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGTA TTTTATTGGC GGGAGGAACA GGTTCACGTT TGCATCCATT GACATTGGCA
ATGAGCAAAC AGATGATGCC GATCTATGAT AAGCCGATGA TTTATTATCC ATTATCCTGT
TTGATGCTGG CAGGAATAAG AGAAATATTA ATTATTTCTA CCCCTCAGGA TTTACCGAAC
TTTCAGAAGT TGCTAGGTGA TGGGAGTGCG CTGGGCTGTA GATTTGAATA CGCTGTACAG
CCCTCACCGG ATGGGCTCGC GCAGGCATTT GTAATTGGAG AACAATTTAT CGGAAACGAT
AAAGTAGCAT TAATCTTAGG AGATAATATT TTTTATGGCT CTGGCCTTGG CCGGTTATTG
CATTCACACA ATGATCCGGA TGGCGCAGTG ATATTTGCTT ATCACGTTAC AGATCCGGAA
CGTTACGGCG TTGTTGATTT TGATGATGAT ATGAATGCAT TGTCGATTGA AGAAAAACCA
ATCAAACCAA AATCTAATTA TGCGGTACCA GGTGTATATT TCTACGACAA CAGTGTAATT
GATATAGCTA AGAATTTAAA ACCAAGTTCA AGAGGTGAGC TTGAAATTAC GGATGTAAAT
AAAATCTATT TAGAAAAAAA TAAATTAAAA GTTGCTGTAT TGAACAGAGG TACAGCCTGG
CTGGATACGG GTACATTTGC TTCTTTAATG CAGGCTGGTG AGTTTGTCCG TGTAATTGAA
GAGCGCCAGG GTTTAAAAGT AGGCTGCATT GAAGAAATTG CTTATACCAT GAAGTTTATA
ACAAAAGAAC AATTGGAGGC ATTGGCAAAG CCGTTAATGA AAAGCGGCTA TGGCCAGTAT
TTACTTGGCC TGATCAAAAA TAAATAA
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| Protein sequence | MKGILLAGGT GSRLHPLTLA MSKQMMPIYD KPMIYYPLSC LMLAGIREIL IISTPQDLPN
FQKLLGDGSA LGCRFEYAVQ PSPDGLAQAF VIGEQFIGND KVALILGDNI FYGSGLGRLL
HSHNDPDGAV IFAYHVTDPE RYGVVDFDDD MNALSIEEKP IKPKSNYAVP GVYFYDNSVI
DIAKNLKPSS RGELEITDVN KIYLEKNKLK VAVLNRGTAW LDTGTFASLM QAGEFVRVIE
ERQGLKVGCI EEIAYTMKFI TKEQLEALAK PLMKSGYGQY LLGLIKNK
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