| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2240 |
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| Symbol | |
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| ID | 4604490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2703745 |
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| End bp | 2704662 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781637 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_928115 |
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| Protein GI | 119775375 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.572666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTTA ACATTCAGCA TTCAGCATTT AACACTCAAA AGACCAAAGG CATTATCCTG
GCGGGCGGTA CCGGTAGCAG GCTTTATCCT ATTACCCGCG GCGTATCCAA GCAGTTGTTG
CCCGTGTACG ACAAACCCAT GGTGTACTAT CCACTGTCGG TGCTTATGCT TGCCGGCATT
CGCGACATCC TGCTGATATC CACGGCAAGT GACCTTGCAG GTTTCCAATC TTTGCTCGGT
GATGGCAGTG GCCTTGGCAT TCGCATCAGT TATGCAGTTC AATCCAAACC CGAAGGGATA
GCCCAGGCGT TTTTAATCGG TGAAGACTTT ATCGGTAATG ACAAGGTTGC CCTCATCCTG
GGTGACAATA TTTTCTACGG CCAAAGCTTT TCCCGGCAGC TGCAGCAGGC CGCGGATTGC
TCCCTTGGCG CTACGGTTTT TGCCTACCAT GTCACGAACC CCGAGCGATT TGGCGTGGTG
GAGTTTGATA ACACAGGCCG TGCTGTCAGC ATTGAAGAAA AGCCTCGCGA GCCCAAGTCC
CATTACGCTG TCACCGGCTT GTATTTTTAC GATAACCAGG TCATTGAGTT TGCAAAAAGC
CTTAGGCCCT CGGCACGCGG AGAGCTTGAA ATTACCGACA TCAATAATGC CTATCTCGCA
GCCAACCAGT TGCAGGTCAG TGTGCTTGGT CGCGGCTTTG CCTGGTTGGA CACGGGGACC
CACGATGCTC TAATGGAAGC CGGGCATTTT GTGCAAACCA TAGAGAAGCG TCAGGGGCTG
AAAATTGCCT GCTTGGAGGA AATTGCATAC CGCAACGGTT GGATATCGAC AGAGACCTTG
TTGCAGCACG CAAAGGCGCT TAGTCAGAGT GGGTATGGGG ATTATTTACG GCAGCTGGTC
TGGGACGCTT CGCTTTAG
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| Protein sequence | MSLNIQHSAF NTQKTKGIIL AGGTGSRLYP ITRGVSKQLL PVYDKPMVYY PLSVLMLAGI
RDILLISTAS DLAGFQSLLG DGSGLGIRIS YAVQSKPEGI AQAFLIGEDF IGNDKVALIL
GDNIFYGQSF SRQLQQAADC SLGATVFAYH VTNPERFGVV EFDNTGRAVS IEEKPREPKS
HYAVTGLYFY DNQVIEFAKS LRPSARGELE ITDINNAYLA ANQLQVSVLG RGFAWLDTGT
HDALMEAGHF VQTIEKRQGL KIACLEEIAY RNGWISTETL LQHAKALSQS GYGDYLRQLV
WDASL
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