More than 300 homologs were found in PanDaTox collection
for query gene Gobs_4306 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_4306  glucose-1-phosphate thymidylyltransferase  100 
 
 
290 aa  581  1.0000000000000001e-165  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.204948  n/a   
 
 
-
 
NC_012669  Bcav_1190  glucose-1-phosphate thymidylyltransferase  69.93 
 
 
294 aa  400  9.999999999999999e-111  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal  0.0390929 
 
 
-
 
NC_008255  CHU_3390  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
288 aa  398  9.999999999999999e-111  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.105005 
 
 
-
 
NC_013037  Dfer_2896  glucose-1-phosphate thymidylyltransferase  65.51 
 
 
288 aa  395  1e-109  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.257197 
 
 
-
 
NC_013131  Caci_8194  glucose-1-phosphate thymidylyltransferase  67.13 
 
 
289 aa  395  1e-109  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_09040  Glucose-1-phosphate thymidylyltransferase  68.29 
 
 
292 aa  393  1e-108  Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00724889  normal  0.162392 
 
 
-
 
NC_013530  Xcel_2557  glucose-1-phosphate thymidylyltransferase  66.78 
 
 
287 aa  393  1e-108  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0967265  n/a   
 
 
-
 
NC_013061  Phep_4022  glucose-1-phosphate thymidylyltransferase  64.91 
 
 
286 aa  393  1e-108  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2410  glucose-1-phosphate thymidylyltransferase  66.67 
 
 
290 aa  391  1e-108  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.140851 
 
 
-
 
NC_009441  Fjoh_0331  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
291 aa  393  1e-108  Flavobacterium johnsoniae UW101  Bacteria  normal  0.284071  n/a   
 
 
-
 
NC_013132  Cpin_0181  glucose-1-phosphate thymidylyltransferase  63.64 
 
 
289 aa  394  1e-108  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2349  glucose-1-phosphate thymidylyltransferase  68.18 
 
 
290 aa  387  1e-107  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0181385  hitchhiker  0.00000600969 
 
 
-
 
NC_013730  Slin_5841  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
286 aa  390  1e-107  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.572504 
 
 
-
 
NC_014158  Tpau_3472  glucose-1-phosphate thymidylyltransferase  67.48 
 
 
291 aa  388  1e-107  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.483164  n/a   
 
 
-
 
NC_013441  Gbro_0596  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
291 aa  385  1e-106  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2688  glucose-1-phosphate thymidylyltransferase  63.76 
 
 
287 aa  382  1e-105  Arthrobacter sp. FB24  Bacteria  normal  0.0105243  n/a   
 
 
-
 
NC_008726  Mvan_0603  glucose-1-phosphate thymidylyltransferase  66.32 
 
 
287 aa  379  1e-104  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0423586  normal 
 
 
-
 
NC_014230  CA2559_13103  glucose-1-phosphate thymidylyltransferase  59.22 
 
 
286 aa  376  1e-103  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10339  alpha-D-glucose-1-phosphate thymidylyltransferase rmlA  63.64 
 
 
288 aa  376  1e-103  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_2032  glucose-1-phosphate thymidylyltransferase  64.36 
 
 
312 aa  375  1e-103  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0055  glucose-1-phosphate thymidylyltransferase  65.26 
 
 
290 aa  370  1e-101  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0829752  n/a   
 
 
-
 
NC_008146  Mmcs_0436  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
287 aa  369  1e-101  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4134  glucose-1-phosphate thymidylyltransferase  61.19 
 
 
293 aa  368  1e-101  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.886764  normal 
 
 
-
 
NC_009077  Mjls_0423  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
287 aa  370  1e-101  Mycobacterium sp. JLS  Bacteria  normal  0.0590699  normal 
 
 
-
 
NC_012880  Dd703_3286  glucose-1-phosphate thymidylyltransferase  58.04 
 
 
288 aa  370  1e-101  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0446  glucose-1-phosphate thymidylyltransferase  63.29 
 
 
287 aa  369  1e-101  Mycobacterium sp. KMS  Bacteria  normal  hitchhiker  0.00521605 
 
 
-
 
NC_009052  Sbal_2889  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
286 aa  365  1e-100  Shewanella baltica OS155  Bacteria  normal  0.4055  n/a   
 
 
-
 
NC_011992  Dtpsy_0555  glucose-1-phosphate thymidylyltransferase  60.21 
 
 
296 aa  366  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2597  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
297 aa  366  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1681  glucose-1-phosphate thymidylyltransferase  58.76 
 
 
292 aa  367  1e-100  Shewanella woodyi ATCC 51908  Bacteria  normal  0.180776  normal 
 
 
-
 
NC_008700  Sama_2240  glucose-1-phosphate thymidylyltransferase  59.66 
 
 
305 aa  364  1e-100  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.572666 
 
 
-
 
NC_009438  Sputcn32_2539  glucose-1-phosphate thymidylyltransferase  57.64 
 
 
289 aa  364  1e-99  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00988  glucose-1-phosphate thymidylyltransferase  59.17 
 
 
293 aa  363  1e-99  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_001807  glucose-1-phosphate thymidylyltransferase  57.64 
 
 
293 aa  363  1e-99  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3029  glucose-1-phosphate thymidylyltransferase  58.39 
 
 
291 aa  363  1e-99  Shewanella baltica OS195  Bacteria  normal  normal  0.173381 
 
 
-
 
NC_009338  Mflv_3295  glucose-1-phosphate thymidylyltransferase  64.34 
 
 
289 aa  364  1e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.092975  normal  0.141997 
 
 
-
 
NC_007512  Plut_0416  glucose-1-phosphate thymidylyltransferase, long form  59.93 
 
 
292 aa  363  2e-99  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_02720  Glucose-1-phosphate thymidylyltransferase  63.29 
 
 
307 aa  363  2e-99  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0179  glucose-1-phosphate thymidylyltransferase RmlA  56.6 
 
 
294 aa  362  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I3019  glucose-1-phosphate thymidyl transferase  56.25 
 
 
295 aa  362  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.313086  n/a   
 
 
-
 
NC_011312  VSAL_I0244  glucose-1-phosphate thymidylyltransferase RmlA  56.6 
 
 
294 aa  362  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2829  glucose-1-phosphate thymidylyltransferase  58.16 
 
 
289 aa  362  3e-99  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0574416  n/a   
 
 
-
 
NC_007513  Syncc9902_0637  glucose-1-phosphate thymidylyltransferase, long form  60.9 
 
 
310 aa  362  4e-99  Synechococcus sp. CC9902  Bacteria  normal  0.210198  n/a   
 
 
-
 
NC_007794  Saro_3238  glucose-1-phosphate thymidylyltransferase  62.46 
 
 
301 aa  362  4e-99  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0285  glucose-1-phosphate thymidylyltransferase  62.94 
 
 
287 aa  362  6e-99  Mycobacterium gilvum PYR-GCK  Bacteria  hitchhiker  0.00700603  normal  0.320822 
 
 
-
 
NC_011369  Rleg2_1181  glucose-1-phosphate thymidylyltransferase  62.85 
 
 
289 aa  362  6e-99  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.25108  normal  0.28241 
 
 
-
 
NC_008390  Bamb_0752  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
297 aa  361  6e-99  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03667  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_4187  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4214  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4132  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4006  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4300  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli E24377A  Bacteria  normal  0.671584  n/a   
 
 
-
 
NC_012892  B21_03616  hypothetical protein  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4153  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  7.0000000000000005e-99  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0621  glucose-1-phosphate thymidylyltransferase  60.35 
 
 
293 aa  361  9e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.252794 
 
 
-
 
NC_009708  YpsIP31758_0187  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  9e-99  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0517  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  361  9e-99  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4018  glucose-1-phosphate thymidylyltransferase  58.36 
 
 
305 aa  360  1e-98  Polaromonas sp. JS666  Bacteria  normal  normal  0.520137 
 
 
-
 
NC_007954  Sden_2662  glucose-1-phosphate thymidylyltransferase  57.14 
 
 
289 aa  361  1e-98  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2263  glucose-1-phosphate thymidylyltransferase  60.98 
 
 
305 aa  360  1e-98  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1380  glucose-1-phosphate thymidylyltransferase  57.54 
 
 
286 aa  360  1e-98  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.0000059529 
 
 
-
 
NC_010465  YPK_4028  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
310 aa  360  1e-98  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2131  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
297 aa  360  2e-98  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1270  glucose-1-phosphate thymidylyltransferase  62.54 
 
 
289 aa  359  2e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.106852  normal  0.0645307 
 
 
-
 
NC_010551  BamMC406_0762  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
297 aa  359  3e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2318  glucose-1-phosphate thymidylyltransferase  59.86 
 
 
297 aa  359  3e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009092  Shew_1402  glucose-1-phosphate thymidylyltransferase  57.89 
 
 
291 aa  358  4e-98  Shewanella loihica PV-4  Bacteria  normal  decreased coverage  0.00196644 
 
 
-
 
NC_010681  Bphyt_0879  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
297 aa  358  4e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2677  glucose-1-phosphate thymidylyltransferase  60 
 
 
292 aa  358  4e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.475432  n/a   
 
 
-
 
NC_008542  Bcen2424_0872  glucose-1-phosphate thymidylyltransferase  58.82 
 
 
297 aa  358  4e-98  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3810  glucose-1-phosphate thymidylyltransferase  60.49 
 
 
292 aa  358  5e-98  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1786  glucose-1-phosphate thymidylyltransferase  55.21 
 
 
292 aa  358  5e-98  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0166  glucose-1-phosphate thymidylyltransferase  59.09 
 
 
293 aa  358  6e-98  Serratia proteamaculans 568  Bacteria  normal  0.455037  normal 
 
 
-
 
NC_008786  Veis_0696  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
294 aa  358  6e-98  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.53714  normal 
 
 
-
 
NC_011353  ECH74115_5222  glucose-1-phosphate thymidylyltransferase  58.74 
 
 
293 aa  358  7e-98  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.350144  normal 
 
 
-
 
NC_007969  Pcryo_0625  glucose-1-phosphate thymidylyltransferase  59.23 
 
 
290 aa  358  7e-98  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.150141 
 
 
-
 
NC_010803  Clim_1781  glucose-1-phosphate thymidylyltransferase  58.13 
 
 
298 aa  358  8e-98  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000367124  n/a   
 
 
-
 
NC_004347  SO_3186  glucose-1-phosphate-thymidylyltransferase  55.59 
 
 
304 aa  357  9.999999999999999e-98  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_2130  glucose-1-phosphate thymidylyltransferase  58.68 
 
 
293 aa  357  1.9999999999999998e-97  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1238  glucose-1-phosphate thymidylyltransferase  57.24 
 
 
296 aa  356  1.9999999999999998e-97  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.981269 
 
 
-
 
NC_007651  BTH_I1470  glucose-1-phosphate thymidylyltransferase  59.52 
 
 
312 aa  356  1.9999999999999998e-97  Burkholderia thailandensis E264  Bacteria  normal  0.759037  n/a   
 
 
-
 
NC_010508  Bcenmc03_0843  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
297 aa  356  1.9999999999999998e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0237145 
 
 
-
 
NC_008060  Bcen_0390  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
297 aa  357  1.9999999999999998e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3121  glucose-1-phosphate thymidylyltransferase  61.19 
 
 
293 aa  356  1.9999999999999998e-97  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2342  glucose-1-phosphate thymidylyltransferase  58.08 
 
 
292 aa  356  1.9999999999999998e-97  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_3464  glucose-1-phosphate thymidylyltransferase  55.9 
 
 
293 aa  356  1.9999999999999998e-97  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.349025 
 
 
-
 
NC_008751  Dvul_2059  glucose-1-phosphate thymidylyltransferase  59.38 
 
 
302 aa  357  1.9999999999999998e-97  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.384582 
 
 
-
 
NC_012917  PC1_1299  glucose-1-phosphate thymidylyltransferase  59.03 
 
 
291 aa  356  2.9999999999999997e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1194  glucose-1-phosphate thymidylyltransferase  55.59 
 
 
292 aa  355  2.9999999999999997e-97  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1919  glucose-1-phosphate thymidylyltransferase  58.97 
 
 
298 aa  356  2.9999999999999997e-97  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.2077 
 
 
-
 
NC_010814  Glov_0478  glucose-1-phosphate thymidylyltransferase  58.62 
 
 
293 aa  356  2.9999999999999997e-97  Geobacter lovleyi SZ  Bacteria  normal  0.543511  n/a   
 
 
-
 
NC_009656  PSPA7_5902  glucose-1-phosphate thymidylyltransferase  58.82 
 
 
293 aa  355  2.9999999999999997e-97  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15940  glucose-1-phosphate thymidylyltransferase  59.17 
 
 
293 aa  356  2.9999999999999997e-97  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3489  glucose-1-phosphate thymidylyltransferase  59.23 
 
 
295 aa  355  2.9999999999999997e-97  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.374251 
 
 
-
 
NC_008340  Mlg_2319  glucose-1-phosphate thymidylyltransferase  58.62 
 
 
293 aa  355  3.9999999999999996e-97  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.103885 
 
 
-
 
NC_011059  Paes_1726  glucose-1-phosphate thymidylyltransferase  58.82 
 
 
291 aa  355  5e-97  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.00000315653  normal  0.563962 
 
 
-
 
NC_008782  Ajs_0539  glucose-1-phosphate thymidylyltransferase  58.48 
 
 
294 aa  355  5.999999999999999e-97  Acidovorax sp. JS42  Bacteria  normal  0.911631  normal  0.057049 
 
 
-
 
NC_010468  EcolC_1603  glucose-1-phosphate thymidylyltransferase  56.14 
 
 
292 aa  355  5.999999999999999e-97  Escherichia coli ATCC 8739  Bacteria  normal  0.982513  normal 
 
 
-
 
NC_011769  DvMF_1381  glucose-1-phosphate thymidylyltransferase  59.72 
 
 
292 aa  355  5.999999999999999e-97  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>