| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3933 |
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| Symbol | |
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| ID | 5193687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4431879 |
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| End bp | 4432769 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640588406 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001269241 |
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| Protein GI | 148549139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.527502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.192647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAA TCAATCGTAA AGGAATCATC CTGGCAGGCG GTTCGGGAAC GCGTTTGCAC
CCGTTGACCT TGGGTGTTTC CAAGCAAATG CTGCCAATCT ACGACAAGCC GATGATCTTC
TATCCGCTGT CGGTACTCAT GCTGGCGGGT ATGCGTGAGA TCCTGATCAT TTCGACGCCT
GACGATCTGC CGGCGTTTCG CAAGTTGCTC GGGGATGGCA GCCAATATGG CATTCAGTTG
AGCTACGCGG AGCAACCCAG TCCGGATGGC TTGGCTCAAG CATTCATTAT TGGCGAAGAA
TTTATCGGCA ATGACCCTTG CTGCTTGATC CTCGGTGACA ATATTTTCTA TGGTCAGCAT
TTTTCGGATA ATTTGCGCGC CGCTGCCGAG CAAAAAGACG GTGCTACGGT ATTTGGCTAT
CACGTGAACG ATCCCGAGCG CTTTGGTGTC GTTGAATTCG ACAAAAATGG CCGCGCCCTT
AGCATTGAGG AAAAGCCCGC AGCACCGAAG TCCAACTATG CTGTGACCGG TTTGTATTTC
TACGATAACG ACGTGGTCGA GATCGCCAAA AGCATCAAGC CTTCCGCGCG CGGTGAGCTC
GAAATCACCG ATGTCAACCG TGCCTATTTG GACAGGAAGT CGCTTACGGT GCAGATGCTG
GGTCGCGGTT TTGCTTGGCT GGACACAGGC ACCCATGAGT CGCTGCTAGA GGCTAGCCAT
TTTGTTCATA CAATCGAGCA GCGCCAAGGC TGGAAAGTAG CGTGCCTTGA GGAAATTGGC
TATGCCAACG GCTGGATTTC GAAAGAGCAA GTCGAGGACC AAGCAGAGAA GCTGAAAAAG
ACCGGCTATG GTCAGTACCT GAAAAAGTTG CTGGACGTCG GGGCTCACTG A
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| Protein sequence | MNAINRKGII LAGGSGTRLH PLTLGVSKQM LPIYDKPMIF YPLSVLMLAG MREILIISTP
DDLPAFRKLL GDGSQYGIQL SYAEQPSPDG LAQAFIIGEE FIGNDPCCLI LGDNIFYGQH
FSDNLRAAAE QKDGATVFGY HVNDPERFGV VEFDKNGRAL SIEEKPAAPK SNYAVTGLYF
YDNDVVEIAK SIKPSARGEL EITDVNRAYL DRKSLTVQML GRGFAWLDTG THESLLEASH
FVHTIEQRQG WKVACLEEIG YANGWISKEQ VEDQAEKLKK TGYGQYLKKL LDVGAH
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