| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1983 |
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| Symbol | rfbA |
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| ID | 7387261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1629965 |
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| End bp | 1630828 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651224 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_002549420 |
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| Protein GI | 222148463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.967411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGTA TCATTCTAGC CGGTGGCAGC GGCACCCGCC TGCATCCCAT GACGCTAGTC
ACCTCCAAGC AGCTCATGCC TGTCTATGAC AAGCCGATGA TCTATTATCC GCTCTCGACG
CTGATGCTGG CCGGGATTCG CGACATCCTG ATCATCTCGA CGCCAAAGGA TCTGCCGAAC
TTTCAAAGCC TGCTGGGCGA TGGGTCGAAA TGGGGGATTT CGTTGACCTA TGCCGAGCAG
CCGTCACCGG ATGGCCTGGC GCAGGCCTAT ATTATCGGCG CGGATTTCGT CGGCTCTAAT
CCGTCTTGTT TGATCCTCGG CGACAATATT TTCTATGGCC ATGGTGTCAA CGACCTGTTC
AGAAGTGCTG TGGCACGCAA TGACGGGGCA ACCGTATTTG CCTATCACGT CAATGATCCC
GAGCGGTACG GCGTCGTGGA ATTCGACAAG GACATGAAGG CGATTTCGAT CGAGGAAAAG
CCGCCAACGC CGCGGTCGAG CTGGGCCGTG ACCGGGCTAT ATTTCTACGA CAAGGATGTC
GTTGATATCG CTGCAAACCT GAAGCCATCG GCGCGTGGCG AGCTGGAGAT CACCGACGTC
AACCGCGTGT ATCTAGAACG CGGTCGGCTG AACGTGGTGA AGATGGGCCG CGGCTATGCG
TGGCTGGATA CCGGCACGCC CGACAGTCTA TTGGATGCCT CGGAATTCGT CGCCACGCTG
GAACGCCGTC AGGGCTTCAA GATTTCCTGC CCGGAAGAGA TCGCCTATCG GCTCGGTTTC
ATCGACGCCC AGCAGTTGGA AGCGCTCGGC CTGCAATATG GCAAGAGCGC TTATGGGCAA
TATCTGCTGA AAAAAGTGCT CTAA
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| Protein sequence | MKGIILAGGS GTRLHPMTLV TSKQLMPVYD KPMIYYPLST LMLAGIRDIL IISTPKDLPN
FQSLLGDGSK WGISLTYAEQ PSPDGLAQAY IIGADFVGSN PSCLILGDNI FYGHGVNDLF
RSAVARNDGA TVFAYHVNDP ERYGVVEFDK DMKAISIEEK PPTPRSSWAV TGLYFYDKDV
VDIAANLKPS ARGELEITDV NRVYLERGRL NVVKMGRGYA WLDTGTPDSL LDASEFVATL
ERRQGFKISC PEEIAYRLGF IDAQQLEALG LQYGKSAYGQ YLLKKVL
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