| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1319 |
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| Symbol | |
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| ID | 4251339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1528892 |
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| End bp | 1529767 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638117904 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_733455 |
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| Protein GI | 113969662 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0322301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA TTATTTTAGC TGGCGGCTCA GGCACACGAC TGTATCCCAT TACTATGGGC
GTATCAAAGC AGTTACTACC AGTTTACGAC AAACCTATGA TTTACTACCC TCTTTCGGTG
TTAATGCTCG CGGGTATTAA GGATATTTTG ATTATCACTA CCCCAGAAGA TTGCGATAGC
TTCAAGCGTC TTCTCGGTGA CGGATCTCAA TTTGGTATTA AGCTCGAATA TGCTCTCCAG
CCAAGCCCCG ATGGTTTAGC ACAAGCATTT ATTATTGGCG AAGAGTTTAT TGGTAATTCG
AGTGTGTGCT TGGTTCTTGG CGATAATATT TTTTATGGTC AGGGTTTTAG TGCCAAGCTG
AAAAAAGCTG TCGAGAAGGC TCAGACTGGA GAAGCTGCGA CTGTTTTTGG TTACCAAGTT
AAAGATCCTG AACGTTTTGG TGTTGTAGAA TTTGACCAAA ACCAAAAAGC CATTTCTATT
GAGGAAAAAC CTGTAAATCC TAAAAGTCAC TATGCAGTCA CTGGACTCTA TTTTTATCCT
AATAATGTTG TTGAGATGGC AAAGCGAGTT AAGCCATCTG AGCGTGGTGA ACTTGAAATA
ACAACTTTAA ATGACATGTA CCTTAACCAG GGGTATTTGC ATGTTGAAAT GTTGGGACGC
GGTTTTGCTT GGTTGGATAC AGGTACCCAT GAAAGCTTGT TAGAAGCAGC ACAGTTTGTT
GAAACGTTAG AAAAACGCCA AGGTTATAAA ATCGCCTGTT TAGAAGAGAT TGCTTATTTG
CAGCATTGGC TAACTGAAGA GCAGTTAATG GCGCGCGGCG AGTTGATGAG CAAAAACAGT
TATGGCCAAT ATCTGTTAAC CTTAGCTAAA CCCTAA
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| Protein sequence | MKGIILAGGS GTRLYPITMG VSKQLLPVYD KPMIYYPLSV LMLAGIKDIL IITTPEDCDS
FKRLLGDGSQ FGIKLEYALQ PSPDGLAQAF IIGEEFIGNS SVCLVLGDNI FYGQGFSAKL
KKAVEKAQTG EAATVFGYQV KDPERFGVVE FDQNQKAISI EEKPVNPKSH YAVTGLYFYP
NNVVEMAKRV KPSERGELEI TTLNDMYLNQ GYLHVEMLGR GFAWLDTGTH ESLLEAAQFV
ETLEKRQGYK IACLEEIAYL QHWLTEEQLM ARGELMSKNS YGQYLLTLAK P
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