More than 300 homologs were found in PanDaTox collection
for query gene Tery_3453 on replicon NC_008312
Organism: Trichodesmium erythraeum IMS101



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008312  Tery_3453  short-chain dehydrogenase/reductase SDR  100 
 
 
267 aa  550  1e-155  Trichodesmium erythraeum IMS101  Bacteria  normal  0.282255  normal 
 
 
-
 
NC_011729  PCC7424_0488  short-chain dehydrogenase/reductase SDR  53.96 
 
 
261 aa  297  2e-79  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  49.43 
 
 
277 aa  280  1e-74  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_007413  Ava_0943  Short-chain dehydrogenase/reductase SDR  48.86 
 
 
293 aa  268  5.9999999999999995e-71  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1704  short-chain dehydrogenase/reductase SDR  37.59 
 
 
327 aa  175  9e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.151565  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  34.09 
 
 
264 aa  162  5.0000000000000005e-39  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010172  Mext_1019  short-chain dehydrogenase/reductase SDR  39.02 
 
 
330 aa  160  2e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.0961773  normal 
 
 
-
 
NC_011738  PCC7424_5709  short-chain dehydrogenase/reductase SDR  35.74 
 
 
347 aa  159  6e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  37.55 
 
 
332 aa  157  1e-37  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_011757  Mchl_0767  short-chain dehydrogenase/reductase SDR  38.26 
 
 
330 aa  155  6e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.415615 
 
 
-
 
NC_009621  Smed_5220  short-chain dehydrogenase/reductase SDR  43.17 
 
 
279 aa  155  9e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  36.33 
 
 
278 aa  153  2.9999999999999998e-36  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  33.72 
 
 
258 aa  152  5.9999999999999996e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0451  short-chain dehydrogenase/reductase SDR  32.18 
 
 
339 aa  151  1e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_4381  short-chain dehydrogenase/reductase SDR  34.8 
 
 
248 aa  148  8e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.297747  hitchhiker  0.00314525 
 
 
-
 
NC_008148  Rxyl_0016  short-chain dehydrogenase/reductase SDR  40.21 
 
 
260 aa  148  1.0000000000000001e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4205  short chain dehydrogenase/reductase family oxidoreductase  32.58 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  32.34 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  32.34 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  32.34 
 
 
264 aa  147  2.0000000000000003e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1481  short-chain dehydrogenase/reductase SDR  39.13 
 
 
239 aa  147  2.0000000000000003e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.175599  normal 
 
 
-
 
NC_010505  Mrad2831_1361  short-chain dehydrogenase/reductase SDR  36.26 
 
 
334 aa  145  5e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0134131 
 
 
-
 
NC_010581  Bind_2990  short-chain dehydrogenase/reductase SDR  33.46 
 
 
336 aa  145  9e-34  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.753592 
 
 
-
 
NC_011886  Achl_3010  short-chain dehydrogenase/reductase SDR  33.85 
 
 
276 aa  144  1e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000215509 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  32.2 
 
 
264 aa  144  1e-33  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_013922  Nmag_1126  short-chain dehydrogenase/reductase SDR  34.51 
 
 
338 aa  144  1e-33  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013132  Cpin_4702  short-chain dehydrogenase/reductase SDR  39.2 
 
 
272 aa  144  1e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.315563  normal  0.0714958 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  31.82 
 
 
264 aa  143  2e-33  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_3170  putative Short-chain dehydrogenase/reductase  34.48 
 
 
544 aa  143  3e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0745281 
 
 
-
 
NC_012918  GM21_0120  short-chain dehydrogenase/reductase SDR  32.44 
 
 
354 aa  143  3e-33  Geobacter sp. M21  Bacteria  n/a    normal  0.718494 
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  31.97 
 
 
264 aa  142  4e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0481  short-chain dehydrogenase/reductase SDR  36.23 
 
 
328 aa  142  4e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  32.18 
 
 
275 aa  142  4e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_013730  Slin_3321  short-chain dehydrogenase/reductase SDR  36.89 
 
 
351 aa  142  5e-33  Spirosoma linguale DSM 74  Bacteria  normal  0.358421  normal 
 
 
-
 
NC_011772  BCG9842_B0992  oxidoreductase, short-chain dehydrogenase/reductase family  31.82 
 
 
264 aa  142  6e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0736  Short-chain dehydrogenase/reductase SDR  35.71 
 
 
272 aa  142  8e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0951  short-chain dehydrogenase/reductase SDR  37.88 
 
 
261 aa  142  8e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  31.44 
 
 
264 aa  142  8e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_013037  Dfer_2713  short-chain dehydrogenase/reductase SDR  34.38 
 
 
266 aa  141  9.999999999999999e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3131  short-chain dehydrogenase/reductase SDR  33.06 
 
 
245 aa  140  9.999999999999999e-33  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2674  short chain dehydrogenase  36.91 
 
 
286 aa  141  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.570073  normal 
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  38.5 
 
 
248 aa  141  9.999999999999999e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_013093  Amir_3200  short-chain dehydrogenase/reductase SDR  36.58 
 
 
341 aa  141  9.999999999999999e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  32.17 
 
 
257 aa  140  1.9999999999999998e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_009621  Smed_5892  short-chain dehydrogenase/reductase SDR  34.41 
 
 
240 aa  140  1.9999999999999998e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.197583  normal  0.684579 
 
 
-
 
NC_011884  Cyan7425_1902  short chain dehydrogenase  32.69 
 
 
269 aa  140  3e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.0327948  normal 
 
 
-
 
NC_011725  BCB4264_A4244  oxidoreductase, short-chain dehydrogenase/reductase family  31.44 
 
 
264 aa  140  3e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2427  short chain dehydrogenase  36.05 
 
 
442 aa  140  3e-32  Pseudomonas putida F1  Bacteria  normal  0.15313  normal  0.413243 
 
 
-
 
NC_009512  Pput_3745  short-chain dehydrogenase/reductase SDR  38.92 
 
 
279 aa  139  3.9999999999999997e-32  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012853  Rleg_5897  short chain dehydrogenase  42.08 
 
 
328 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3988  short-chain dehydrogenase/reductase SDR  35.52 
 
 
404 aa  139  3.9999999999999997e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.326194 
 
 
-
 
NC_009767  Rcas_2071  short-chain dehydrogenase/reductase SDR  34.07 
 
 
239 aa  139  4.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.420603  normal 
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  32.83 
 
 
264 aa  139  7e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2621  short-chain dehydrogenase/reductase SDR  33.46 
 
 
295 aa  139  7e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.786359 
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  37.84 
 
 
241 aa  137  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0796  short-chain dehydrogenase/reductase SDR  35.11 
 
 
281 aa  138  1e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.35999 
 
 
-
 
NC_009512  Pput_3738  short-chain dehydrogenase/reductase SDR  32.1 
 
 
245 aa  137  2e-31  Pseudomonas putida F1  Bacteria  normal  0.880926  normal 
 
 
-
 
NC_010682  Rpic_3360  short-chain dehydrogenase/reductase SDR  33.97 
 
 
296 aa  137  2e-31  Ralstonia pickettii 12J  Bacteria  normal  0.0880635  normal 
 
 
-
 
NC_013730  Slin_3645  short-chain dehydrogenase/reductase SDR  34.46 
 
 
268 aa  137  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6867  short chain dehydrogenase  40.98 
 
 
333 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3013  short-chain dehydrogenase/reductase SDR  33.59 
 
 
296 aa  136  4e-31  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  36.65 
 
 
236 aa  135  5e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  31.84 
 
 
295 aa  135  7.000000000000001e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_009565  TBFG_12242  short chain dehydrogenase  33.97 
 
 
592 aa  135  7.000000000000001e-31  Mycobacterium tuberculosis F11  Bacteria  normal  0.0208017  normal  0.29752 
 
 
-
 
NC_009621  Smed_5216  short-chain dehydrogenase/reductase SDR  34.38 
 
 
249 aa  135  8e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_3217  short-chain dehydrogenase/reductase SDR  39.13 
 
 
253 aa  135  9e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_04715  Short-chain dehydrogenase/reductase SDR  35.96 
 
 
249 aa  135  9e-31  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.863639  n/a   
 
 
-
 
NC_012853  Rleg_5776  short-chain dehydrogenase/reductase SDR  35.23 
 
 
335 aa  135  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.171589  normal 
 
 
-
 
NC_008009  Acid345_2502  short-chain dehydrogenase/reductase SDR  38.92 
 
 
279 aa  134  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.729969 
 
 
-
 
NC_008312  Tery_2914  short chain dehydrogenase  37 
 
 
255 aa  135  9.999999999999999e-31  Trichodesmium erythraeum IMS101  Bacteria  normal  0.892644  normal  0.135282 
 
 
-
 
NC_008463  PA14_12680  short chain dehydrogenase  36.4 
 
 
278 aa  134  9.999999999999999e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4611  short-chain dehydrogenase/reductase SDR  40 
 
 
356 aa  134  9.999999999999999e-31  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.824493 
 
 
-
 
NC_009441  Fjoh_3887  short-chain dehydrogenase/reductase SDR  34.9 
 
 
326 aa  134  1.9999999999999998e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  0.248139  n/a   
 
 
-
 
NC_007413  Ava_3968  short chain dehydrogenase  38.42 
 
 
269 aa  134  1.9999999999999998e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0231224  normal  0.018096 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  36.41 
 
 
252 aa  134  1.9999999999999998e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6766  putative short-chain dehydrogenase  31.06 
 
 
279 aa  133  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.353478  normal 
 
 
-
 
NC_009620  Smed_3758  short-chain dehydrogenase/reductase SDR  32.83 
 
 
299 aa  134  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.297651  normal 
 
 
-
 
NC_012560  Avin_32520  Short-chain dehydrogenase/reductase SDR protein  36.09 
 
 
278 aa  134  1.9999999999999998e-30  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1733  short chain dehydrogenase  35.94 
 
 
286 aa  133  3e-30  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7667  short-chain dehydrogenase/reductase SDR  34.44 
 
 
332 aa  133  3e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.755346  n/a   
 
 
-
 
NC_010501  PputW619_2737  short-chain dehydrogenase/reductase SDR  32.26 
 
 
245 aa  133  3.9999999999999996e-30  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2604  short chain dehydrogenase  40.1 
 
 
441 aa  133  3.9999999999999996e-30  Pseudomonas putida W619  Bacteria  normal  normal  0.155527 
 
 
-
 
NC_007760  Adeh_3205  short-chain dehydrogenase/reductase SDR  33.2 
 
 
244 aa  132  3.9999999999999996e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0747  short-chain dehydrogenase/reductase SDR  35.87 
 
 
239 aa  133  3.9999999999999996e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.785555  normal  0.162372 
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  36.36 
 
 
248 aa  133  3.9999999999999996e-30  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  36.41 
 
 
317 aa  132  5e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_5076  short chain dehydrogenase  30.3 
 
 
339 aa  132  5e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.5503 
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  35.51 
 
 
244 aa  132  6e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0726  short-chain dehydrogenase/reductase SDR  29.81 
 
 
366 aa  132  6e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.642345  normal 
 
 
-
 
NC_008254  Meso_3901  short-chain dehydrogenase/reductase SDR  35.44 
 
 
280 aa  132  6.999999999999999e-30  Chelativorans sp. BNC1  Bacteria  normal  0.962145  n/a   
 
 
-
 
NC_009441  Fjoh_1309  short-chain dehydrogenase/reductase SDR  32.32 
 
 
267 aa  132  6.999999999999999e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010087  Bmul_5454  short chain dehydrogenase  37.44 
 
 
342 aa  132  6.999999999999999e-30  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00420602 
 
 
-
 
NC_011757  Mchl_0762  short-chain dehydrogenase/reductase SDR  34.43 
 
 
336 aa  132  7.999999999999999e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0353  short-chain dehydrogenase/reductase SDR  34.11 
 
 
262 aa  132  7.999999999999999e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_3368  short-chain dehydrogenase/reductase SDR  37.3 
 
 
241 aa  132  9e-30  'Nostoc azollae' 0708  Bacteria  normal  0.119808  n/a   
 
 
-
 
NC_013595  Sros_8706  short-chain dehydrogenase/reductase SDR  30.13 
 
 
255 aa  131  9e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007633  MCAP_0250  short chain dehydrogenase/reductase family oxidoreductase  30.43 
 
 
240 aa  130  1.0000000000000001e-29  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.183431  n/a   
 
 
-
 
NC_013235  Namu_5046  short-chain dehydrogenase/reductase SDR  38.71 
 
 
291 aa  131  1.0000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0154  short-chain dehydrogenase/reductase SDR  35.1 
 
 
261 aa  131  1.0000000000000001e-29  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1571  Short-chain alcohol dehydrogenase of unknown specificity  36.9 
 
 
243 aa  131  1.0000000000000001e-29  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
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