Gene Acid345_2502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2502 
Symbol 
ID4069871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2958295 
End bp2959134 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID637984519 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_591577 
Protein GI94969529 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.729969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC CAACTTCCAA AGTCTGGATG ATCACCGGCG CTTCCCGTGG CTTCGGTGCA 
GAAATTGCCG CGGCTGCACT GGAGAGGGGC CATCGCGTTG TTGGGACCGC GCGACGCGTT
GATTCTCTTC CTGCGCCTGC GGGCCCGGAA AAATATCTCC GCGTGGCGCT CGATGTGACT
TCTCGCGAGC AAGCCGAAAA CGCAGTTTGC TCCGCGTGCG AATCCTTTGG TCAGATCGAT
GTGCTGGTGA ACAACGCGGG CTACGGATTG TTGGGCTCCG TCGAAGAAAC GAGCGCCGAA
GAAATCGAGC GCCTCTTTCA GACGAACGTC TTCGGTCTTC TCCATGTCAC TCGCGCCGTA
TTGCCCATCT TTCGCAAGCA ACGCTCTGGA CACATCATCA ACATGTCATC GGTGGGTGGC
TTCAGTGCAC GCCCTGGATG GGGACCATAC TCCGCGACAA AGTTCGCGGT GGAAGCACTC
ACCGAATCGC TGCACGCGGA ACTTGCACCA CTCGGCATTC ACGTGACCGC GGTCGAGCCG
GGATCGTTTC GCACCGACTT CCTCGACACC ACTTCGCTCG TCTCCACGAA GAACCGCATT
CCGGATTACG ATTCGACCGT CGGCAAGATG CGCGAATTCG TGGTTGGACG TAGCGGTTTC
CAGCCCGGCG ATCCGAAGAA GCTTGCACAA GCGATTCTTC AACTCGCCGA TCTCGCGGAT
CCACCGGTGC GGCTTCCTCT CGGAACCGAT ACCTTGCGCC GCATCGACGA AAAACAAGCG
TTCGTAAAAG AAGAAACCGA GAGGTGGCGT ACCCTCTCGG CTTCAACGGA CTTCGTTTGA
 
Protein sequence
MSNPTSKVWM ITGASRGFGA EIAAAALERG HRVVGTARRV DSLPAPAGPE KYLRVALDVT 
SREQAENAVC SACESFGQID VLVNNAGYGL LGSVEETSAE EIERLFQTNV FGLLHVTRAV
LPIFRKQRSG HIINMSSVGG FSARPGWGPY SATKFAVEAL TESLHAELAP LGIHVTAVEP
GSFRTDFLDT TSLVSTKNRI PDYDSTVGKM REFVVGRSGF QPGDPKKLAQ AILQLADLAD
PPVRLPLGTD TLRRIDEKQA FVKEETERWR TLSASTDFV