Gene Ava_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2536 
Symbol 
ID3682421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3136809 
End bp3137534 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID637717881 
Productshort chain dehydrogenase 
Protein accessionYP_323046 
Protein GI75908750 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGG AGCAGAAACG ACGCGCTCTG ATTACTGGGG CAAGTAGTGG AATTGGCAAA 
GCAACGGCAT TAGCCTTTGC AAAAGCAGGA ATAGATGTGG CTTTGGTGAG CCGTTCTGGG
GATAAATTGA CACCTGTAGT AGAAGCAACA AAACAGACTG GAGTAGTAGC CAAAGCGTAT
ACTGTAGACT TAGCAGACGT ATCGCAAGTA GAGGCGAAAA TCCAGGCGAT CGCCATTGAC
TTTGGAGACA TAGATATTCT TGTAAATAAT GCGGGTGTAG CATACACAGC TACCTTAAGT
GAAACGCCCT TAGCAGACTG GCAACAAGTA ATTAACTTGA ACCTGACCAG CGTATTTGAA
TGTATTAAAG GAATTTTGCC AAGAATGCGC GCTCGGCATA CAGGCACAAT CATCAATGTG
TCTTCGATTG CAGCGAAACA ATCTTTTCCG CACTGGGGAG TTTACAGCGT CAGTAAAGCA
GGATTAATGG CACTTTCTCA AACCTTGGCA CAAGAAGAAC GTGTCCACGG CATTCGGGTA
AGTGCGATTT GTCCAGGGGC TGTAAATACT GGACTTTGGG ATACAGAGAC GGTTAAAGCT
GACTTTGACC GTTCCAAAAT GCTCACCCCA GAAATTGTGG CTCAGTCAAT TCTTTACACT
GCACTATTAC CACCACAAGC AGTCATTGAT GAATTGACGC TCATGCCCAG CGCAGGTGCG
CTGTAA
 
Protein sequence
MSLEQKRRAL ITGASSGIGK ATALAFAKAG IDVALVSRSG DKLTPVVEAT KQTGVVAKAY 
TVDLADVSQV EAKIQAIAID FGDIDILVNN AGVAYTATLS ETPLADWQQV INLNLTSVFE
CIKGILPRMR ARHTGTIINV SSIAAKQSFP HWGVYSVSKA GLMALSQTLA QEERVHGIRV
SAICPGAVNT GLWDTETVKA DFDRSKMLTP EIVAQSILYT ALLPPQAVID ELTLMPSAGA
L