| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3217 |
|---|
| Symbol | |
|---|
| ID | 3889003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3671206 |
|---|
| End bp | 3671967 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637864765 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_466422 |
|---|
| Protein GI | 86159637 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAC ACGTGAACGG CACCAACATC TCGGGAAAGG TCGTCATCAT CACCGGCGCC
AGCAGCGGCA TGGGCGAGGC GGCGGCCCGG CATCTCGCAG ACCGAGGCGC GATCATCGTG
CTCGGCGCCC GTCGCGTGGA CCGCCTGGAA GCGCTCGCGG GCGAGATCAC GAGGGACGGC
GGCAAGGCGC TCGCCCTCGC CACCGACGTC ACCGACGCCG TGCAGGTCCA GCGCCTGGTC
GACGCGGCCG TCGAGCGCTT CGGGCGCGTC GACGTCATGC TCAACAACGC GGGGCTCATG
CCGCACTCGC CGCTCGAGCG CCGGAAGATC GCCGACTGGG ACCGTACCAT CGACGTCAAC
ATCAAGGGCG TCCTCTACGG CATCGCCGCC GCGCTGCCGC ACATGCAGCG GCAGAAGAGC
GGCCACTTCA TCAATGTCTC GTCCGTCGCG GGCCACCGGG TCGGTCCGGC GGGAGTGGTC
TACTCCGCGA CGAAGACCGC GGTGCGCGTG ATCTCGGAGG GGCTACGGCA GGAGGTGAAG
CCCTGGAACA TCCGCTCCAC GATCATCTCG CCGGGCGCGG TCGCGACGGA GCTGCCCCAG
AGCGTGACGG AGCCGGACGT CGCGCAGGGC ATCGCGCAGT TCTACAGAGA GTACGCGATC
CCTCCGTCCT CGTTCGCTCG CGCCGTCGCG TTCGCGATCG AGCAGCCCGA GGACGTGGAC
ATCAACGAGA TCCTCTTCCG CCCGACTCGG CAGGAGCTGT GA
|
|---|
| Protein sequence | MNGHVNGTNI SGKVVIITGA SSGMGEAAAR HLADRGAIIV LGARRVDRLE ALAGEITRDG
GKALALATDV TDAVQVQRLV DAAVERFGRV DVMLNNAGLM PHSPLERRKI ADWDRTIDVN
IKGVLYGIAA ALPHMQRQKS GHFINVSSVA GHRVGPAGVV YSATKTAVRV ISEGLRQEVK
PWNIRSTIIS PGAVATELPQ SVTEPDVAQG IAQFYREYAI PPSSFARAVA FAIEQPEDVD
INEILFRPTR QEL
|
|---|
| |