63 homologs were found in PanDaTox collection
for query gene Syncc9902_1998 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_1998  CRP/FNR family transcriptional regulator  100 
 
 
207 aa  424  1e-118  Synechococcus sp. CC9902  Bacteria  hitchhiker  0.00839318  n/a   
 
 
-
 
NC_007516  Syncc9605_1574  CRP/FNR family transcriptional regulator  36.7 
 
 
191 aa  124  1e-27  Synechococcus sp. CC9605  Bacteria  normal  0.255141  normal  0.0532067 
 
 
-
 
NC_008820  P9303_17661  regulatory proteins, Crp family protein  35.09 
 
 
260 aa  104  1e-21  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.941841 
 
 
-
 
NC_008819  NATL1_08461  Crp family regulatory proteins  28.14 
 
 
198 aa  79  0.00000000000005  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.836651  hitchhiker  0.00426427 
 
 
-
 
NC_007335  PMN2A_0214  cAMP family transcriptional regulator  28.14 
 
 
198 aa  78.2  0.00000000000009  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_1586  cAMP family transcriptional regulator  29.56 
 
 
182 aa  72  0.000000000005  Synechococcus sp. CC9605  Bacteria  normal  0.406741  hitchhiker  0.00767311 
 
 
-
 
NC_009091  P9301_08671  Crp family regulatory proteins  28.07 
 
 
195 aa  70.1  0.00000000002  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.0277995  n/a   
 
 
-
 
NC_008816  A9601_08701  Crp family regulatory proteins  28.99 
 
 
195 aa  70.1  0.00000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2010  Crp family regulatory protein  28.07 
 
 
212 aa  69.3  0.00000000003  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0814  CRP/FNR family transcriptional regulator  28.07 
 
 
195 aa  69.3  0.00000000004  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.0872325  n/a   
 
 
-
 
NC_008817  P9515_07751  Crp family regulatory proteins  29.11 
 
 
195 aa  67.8  0.0000000001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_09541  Crp family regulatory protein  28.82 
 
 
197 aa  65.5  0.0000000006  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.230149  hitchhiker  0.000196756 
 
 
-
 
NC_008820  P9303_17701  regulatory proteins, Crp family protein  27.81 
 
 
198 aa  62  0.000000007  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.639467 
 
 
-
 
NC_011729  PCC7424_0115  putative transcriptional regulator, Crp/Fnr family  42.62 
 
 
225 aa  58.2  0.0000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.2299 
 
 
-
 
NC_014248  Aazo_2484  putative Crp/Fnr family transcriptional regulator  42.42 
 
 
389 aa  55.1  0.0000008  'Nostoc azollae' 0708  Bacteria  normal  0.399715  n/a   
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  46.77 
 
 
225 aa  53.5  0.000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  31.9 
 
 
244 aa  52  0.000006  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_007413  Ava_2491  Crp/FNR family transcriptional regulator  38.57 
 
 
393 aa  51.6  0.000008  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.116073 
 
 
-
 
NC_010320  Teth514_1376  CRP/FNR family transcriptional regulator  25.99 
 
 
228 aa  50.4  0.00002  Thermoanaerobacter sp. X514  Bacteria  normal  0.271211  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  45.16 
 
 
225 aa  50.1  0.00002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  45.16 
 
 
225 aa  50.1  0.00002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  31.9 
 
 
244 aa  50.8  0.00002  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  31.9 
 
 
244 aa  50.1  0.00003  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  31.9 
 
 
244 aa  50.1  0.00003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  31.9 
 
 
222 aa  49.7  0.00003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_007516  Syncc9605_1146  CRP/FNR family transcriptional regulator  35.71 
 
 
211 aa  50.1  0.00003  Synechococcus sp. CC9605  Bacteria  normal  0.242619  normal 
 
 
-
 
NC_013161  Cyan8802_0353  putative transcriptional regulator, Crp/Fnr family  46.03 
 
 
200 aa  48.9  0.00006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0346  putative transcriptional regulator, Crp/Fnr family  46.03 
 
 
200 aa  48.9  0.00006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2356  Crp/FNR family transcriptional regulator  36.36 
 
 
208 aa  47.8  0.0001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  26.7 
 
 
236 aa  47.4  0.0002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  26.7 
 
 
236 aa  47.4  0.0002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  30.67 
 
 
210 aa  47  0.0002  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  35.38 
 
 
238 aa  47.4  0.0002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  43.55 
 
 
223 aa  46.6  0.0003  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  43.55 
 
 
223 aa  46.2  0.0003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  43.55 
 
 
223 aa  46.6  0.0003  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  39.44 
 
 
223 aa  46.2  0.0004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  40.58 
 
 
234 aa  45.4  0.0005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  38.03 
 
 
231 aa  45.8  0.0005  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  42.37 
 
 
222 aa  45.4  0.0006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  40.32 
 
 
243 aa  45.1  0.0007  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  40.32 
 
 
243 aa  45.1  0.0008  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  39.73 
 
 
254 aa  44.7  0.001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  40.32 
 
 
238 aa  44.3  0.001  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0463  Crp/FNR family transcriptional regulator  34.78 
 
 
197 aa  44.7  0.001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.778777  normal  0.174596 
 
 
-
 
NC_008312  Tery_3616  CRP/FNR family transcriptional regulator  35.82 
 
 
256 aa  44.7  0.001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0729234 
 
 
-
 
NC_013947  Snas_4977  transcriptional regulator, Crp/Fnr family  41.07 
 
 
234 aa  44.7  0.001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.111601 
 
 
-
 
NC_011729  PCC7424_3970  putative transcriptional regulator, Crp/Fnr family  45.65 
 
 
199 aa  44.3  0.001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_1694  Crp/FNR family transcriptional regulator  38.27 
 
 
230 aa  44.3  0.001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.233971  n/a   
 
 
-
 
NC_011884  Cyan7425_0207  transcriptional regulator, Crp/Fnr family  42.31 
 
 
218 aa  44.3  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.163925 
 
 
-
 
NC_007413  Ava_1750  Crp/FNR family transcriptional regulator  40 
 
 
239 aa  43.9  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.499959  normal 
 
 
-
 
NC_014248  Aazo_0140  putative Crp/Fnr family transcriptional regulator  40 
 
 
239 aa  43.9  0.002  'Nostoc azollae' 0708  Bacteria  normal  0.0938698  n/a   
 
 
-
 
NC_007604  Synpcc7942_2174  CRP/FNR family transcriptional regulator  31.17 
 
 
209 aa  43.1  0.003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.576133 
 
 
-
 
NC_009972  Haur_1291  CRP/FNR family transcriptional regulator  24.32 
 
 
305 aa  43.5  0.003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.06322  n/a   
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  41.94 
 
 
221 aa  42.4  0.004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_008820  P9303_11071  putative transcriptional regulator, Crp/Fnr family protein  34.43 
 
 
233 aa  42.7  0.004  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  40 
 
 
257 aa  42.7  0.004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  38.71 
 
 
234 aa  42.4  0.005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1555  transcriptional regulator, Crp/Fnr family  55.88 
 
 
230 aa  42.4  0.005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0437  putative transcriptional regulator, Crp/Fnr family with PAS/PAC sensor  38.33 
 
 
405 aa  41.6  0.008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  36.21 
 
 
233 aa  41.2  0.01  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0390  cyclic nucleotide-binding protein  42.22 
 
 
218 aa  41.2  0.01  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000226333  n/a   
 
 
-
 
NC_013947  Snas_1232  transcriptional regulator, Crp/Fnr family  23.97 
 
 
235 aa  41.2  0.01  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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