More than 300 homologs were found in PanDaTox collection
for query gene Snas_4977 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_4977  transcriptional regulator, Crp/Fnr family  100 
 
 
234 aa  462  1e-129  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.111601 
 
 
-
 
NC_013947  Snas_1232  transcriptional regulator, Crp/Fnr family  59.07 
 
 
235 aa  261  4e-69  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0070  cyclic nucleotide-binding protein  40 
 
 
227 aa  166  2.9999999999999998e-40  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.376283 
 
 
-
 
NC_013131  Caci_7216  transcriptional regulator, Crp/Fnr family  35.65 
 
 
246 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.726682  normal 
 
 
-
 
NC_013093  Amir_5511  transcriptional regulator, Crp/Fnr family  36.27 
 
 
227 aa  125  5e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.360617  n/a   
 
 
-
 
NC_013093  Amir_6844  transcriptional regulator, Crp/Fnr family  35.19 
 
 
235 aa  123  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0901192  n/a   
 
 
-
 
NC_013595  Sros_1608  putative transcriptional regulator, Crp/Fnr family  35.62 
 
 
248 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5851  transcriptional regulator, Crp/Fnr family  34.62 
 
 
242 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0930905  n/a   
 
 
-
 
NC_009921  Franean1_5506  Crp/FNR family transcriptional regulator  33.33 
 
 
246 aa  119  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.324567  normal  0.438631 
 
 
-
 
NC_009921  Franean1_1677  cyclic nucleotide-binding protein  34.7 
 
 
258 aa  118  9e-26  Frankia sp. EAN1pec  Bacteria  normal  0.506462  normal  0.511537 
 
 
-
 
NC_013595  Sros_6885  putative transcriptional regulator, Crp/Fnr family  38.5 
 
 
240 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5850  transcriptional regulator, Crp/Fnr family  32.52 
 
 
223 aa  114  2.0000000000000002e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0120826  n/a   
 
 
-
 
NC_013739  Cwoe_0602  transcriptional regulator, Crp/Fnr family  32.72 
 
 
225 aa  111  1.0000000000000001e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.628877 
 
 
-
 
NC_013510  Tcur_1167  transcriptional regulator, Crp/Fnr family  33.65 
 
 
231 aa  110  3e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0781257  n/a   
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  34.85 
 
 
225 aa  109  4.0000000000000004e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  34.74 
 
 
225 aa  108  7.000000000000001e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  32.59 
 
 
228 aa  108  7.000000000000001e-23  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  29.86 
 
 
226 aa  102  4e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  34.21 
 
 
220 aa  102  5e-21  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  34.21 
 
 
224 aa  100  2e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  33.33 
 
 
228 aa  100  2e-20  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  32.8 
 
 
226 aa  100  2e-20  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  33.87 
 
 
226 aa  100  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  33.33 
 
 
225 aa  100  3e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  33.33 
 
 
225 aa  99.8  4e-20  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1644  Crp/FNR family transcriptional regulator  32.84 
 
 
223 aa  99  5e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  34.81 
 
 
225 aa  99.4  5e-20  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  32.12 
 
 
225 aa  97.8  1e-19  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  32.8 
 
 
228 aa  97.1  2e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  28.35 
 
 
231 aa  96.3  4e-19  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  32.26 
 
 
228 aa  96.3  4e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  31.25 
 
 
224 aa  95.9  4e-19  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_04890  cAMP-binding protein  30.37 
 
 
226 aa  95.5  6e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.84759 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  30.69 
 
 
225 aa  95.5  7e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1659  cyclic nucleotide-binding  30.84 
 
 
223 aa  95.1  8e-19  Salinispora tropica CNB-440  Bacteria  normal  0.834954  normal 
 
 
-
 
NC_010816  BLD_0979  cAMP-binding protein  30.48 
 
 
239 aa  94.7  1e-18  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1118  transcriptional regulator, Crp/Fnr family  29.24 
 
 
240 aa  92.8  4e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8981  putative transcriptional regulator, Crp/Fnr family  31.91 
 
 
222 aa  92  7e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2257  transcriptional regulator, Crp/Fnr family  36.54 
 
 
234 aa  92  8e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00000784359  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  28.16 
 
 
225 aa  91.7  8e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4286  Crp/FNR family transcriptional regulator  35.81 
 
 
241 aa  91.3  1e-17  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0328  Crp/FNR family transcriptional regulator  35.35 
 
 
246 aa  89.7  3e-17  Frankia sp. EAN1pec  Bacteria  normal  0.0277272  normal  0.0570772 
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  31.72 
 
 
225 aa  89  6e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  32.26 
 
 
224 aa  87.4  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  32.26 
 
 
224 aa  87.4  2e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_013721  HMPREF0424_0303  cyclic nucleotide-binding domain protein  30.19 
 
 
236 aa  87.4  2e-16  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.232206 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  32.26 
 
 
224 aa  87  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0505  cyclic nucleotide-binding protein  32.26 
 
 
224 aa  86.7  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  0.287437  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  26.89 
 
 
243 aa  85.9  5e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  32.26 
 
 
224 aa  85.5  6e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  31.72 
 
 
225 aa  85.5  7e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  34.72 
 
 
225 aa  85.1  8e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  27.14 
 
 
224 aa  84.3  0.000000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_008554  Sfum_2941  Crp/FNR family transcriptional regulator  26.19 
 
 
235 aa  84.7  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5783  transcriptional regulator, Crp/Fnr family  30.29 
 
 
212 aa  83.2  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00268451  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  27.62 
 
 
226 aa  83.2  0.000000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  30.65 
 
 
224 aa  82.4  0.000000000000005  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  30.65 
 
 
224 aa  82.4  0.000000000000005  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
NC_009953  Sare_4762  Crp/FNR family transcriptional regulator  33.33 
 
 
225 aa  82.8  0.000000000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.900483  hitchhiker  0.0000929699 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  30.65 
 
 
224 aa  82.4  0.000000000000005  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  28.57 
 
 
231 aa  82.4  0.000000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_009380  Strop_4322  cyclic nucleotide-binding  32.8 
 
 
225 aa  82  0.000000000000007  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0230513 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  30.65 
 
 
224 aa  82  0.000000000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  30.65 
 
 
224 aa  81.6  0.000000000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  25.59 
 
 
227 aa  81.6  0.000000000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  30.65 
 
 
224 aa  81.3  0.00000000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  31.12 
 
 
224 aa  81.3  0.00000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  29.13 
 
 
214 aa  80.5  0.00000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  29.79 
 
 
222 aa  80.5  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.12 
 
 
219 aa  80.9  0.00000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  26.09 
 
 
225 aa  80.1  0.00000000000003  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  25.35 
 
 
252 aa  79.3  0.00000000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  30.11 
 
 
242 aa  79.3  0.00000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  28.3 
 
 
229 aa  79  0.00000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  28.77 
 
 
227 aa  78.2  0.00000000000009  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_008312  Tery_1557  Crp/FNR family transcriptional regulator  30.16 
 
 
234 aa  78.2  0.00000000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.986178 
 
 
-
 
NC_013739  Cwoe_2918  transcriptional regulator, Crp/Fnr family  31.08 
 
 
226 aa  78.2  0.0000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.172063  normal  0.392966 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  25.7 
 
 
239 aa  78.2  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  24.76 
 
 
226 aa  77  0.0000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  26.7 
 
 
240 aa  77  0.0000000000002  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_009253  Dred_3227  CRP/FNR family transcriptional regulator  23.88 
 
 
232 aa  77  0.0000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  26.92 
 
 
229 aa  77.4  0.0000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25 
 
 
247 aa  76.6  0.0000000000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  25.47 
 
 
235 aa  76.3  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_008148  Rxyl_2076  Crp/FNR family transcriptional regulator  30.14 
 
 
234 aa  75.9  0.0000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.398696  n/a   
 
 
-
 
NC_010002  Daci_4994  cyclic nucleotide-binding protein  26.58 
 
 
247 aa  75.9  0.0000000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.103725  normal 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  22.27 
 
 
226 aa  75.5  0.0000000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  25.24 
 
 
225 aa  75.1  0.0000000000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_013216  Dtox_2750  transcriptional regulator, Crp/Fnr family  26.6 
 
 
222 aa  75.1  0.0000000000009  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000354449  normal  0.602467 
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  27.81 
 
 
225 aa  74.3  0.000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_008261  CPF_0781  Crp/FNR family transcriptional regulator  22.17 
 
 
236 aa  74.3  0.000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0113537  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  29.07 
 
 
228 aa  74.3  0.000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  24.29 
 
 
226 aa  73.9  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  28.06 
 
 
224 aa  73.9  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  24.62 
 
 
239 aa  74.3  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_011901  Tgr7_2797  cAMP-regulatory protein  30.27 
 
 
198 aa  73.6  0.000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.207531  n/a   
 
 
-
 
NC_008262  CPR_0757  Crp/FNR family transcriptional regulator  21.49 
 
 
236 aa  73.6  0.000000000003  Clostridium perfringens SM101  Bacteria  normal  0.0100726  n/a   
 
 
-
 
NC_009636  Smed_0098  CRP/FNR family transcriptional regulator  26.42 
 
 
234 aa  73.2  0.000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.2435  normal 
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  28.27 
 
 
212 aa  72.8  0.000000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  28.65 
 
 
252 aa  72.4  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>