More than 300 homologs were found in PanDaTox collection
for query gene Suden_0987 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_0987  response regulator receiver domain-containing protein  100 
 
 
420 aa  842    Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0969  response regulator receiver domain-containing protein  39.31 
 
 
328 aa  117  3e-25  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.749991  n/a   
 
 
-
 
NC_007575  Suden_0984  response regulator receiver/GGDEF/EAL domain-containing protein  39.13 
 
 
564 aa  112  1.0000000000000001e-23  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  38.82 
 
 
365 aa  112  1.0000000000000001e-23  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0968  response regulator receiver domain-containing protein  41.27 
 
 
317 aa  102  9e-21  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.730939  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  30.77 
 
 
425 aa  102  1e-20  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  37.23 
 
 
547 aa  97.4  4e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.98 
 
 
953 aa  97.4  5e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  34.27 
 
 
236 aa  97.1  5e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4377  multi-sensor signal transduction histidine kinase  37.8 
 
 
636 aa  97.1  5e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  40 
 
 
226 aa  97.1  6e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_007575  Suden_0964  two component transcriptional regulator  35.46 
 
 
258 aa  96.3  9e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.412408  n/a   
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.4 
 
 
953 aa  95.9  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  29.03 
 
 
476 aa  95.9  1e-18  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  32.34 
 
 
438 aa  95.9  1e-18  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  29.03 
 
 
616 aa  95.1  2e-18  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  35.77 
 
 
547 aa  95.5  2e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  32.53 
 
 
566 aa  95.5  2e-18  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0876  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.72 
 
 
709 aa  94.7  2e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.0730078  n/a   
 
 
-
 
NC_009714  CHAB381_1362  DNA-binding response regulator  40.5 
 
 
225 aa  93.6  6e-18  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  40.74 
 
 
226 aa  93.2  8e-18  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  38.89 
 
 
226 aa  92.4  1e-17  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_010814  Glov_1558  response regulator receiver protein  33.08 
 
 
566 aa  91.7  2e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  33.33 
 
 
396 aa  92  2e-17  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  37.7 
 
 
226 aa  92  2e-17  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1837  DNA-binding response regulator  39.81 
 
 
226 aa  90.1  7e-17  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.591446  n/a   
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  35.2 
 
 
304 aa  86.7  6e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  36.8 
 
 
227 aa  86.7  7e-16  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_007575  Suden_0837  two component transcriptional regulator  36.97 
 
 
269 aa  84.7  0.000000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1234  EAL domain protein  25.75 
 
 
589 aa  84.3  0.000000000000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.89994  n/a   
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  29.84 
 
 
502 aa  82  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  30.65 
 
 
517 aa  82  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0363  response regulator receiver  34.21 
 
 
228 aa  81.6  0.00000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2186  response regulator receiver sensor signal transduction histidine kinase  32.56 
 
 
381 aa  80.9  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000654459  hitchhiker  0.000162526 
 
 
-
 
NC_007575  Suden_1242  two component transcriptional regulator  36.59 
 
 
227 aa  80.1  0.00000000000007  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.546498  n/a   
 
 
-
 
NC_007575  Suden_0281  multi-sensor signal transduction histidine kinase  31.45 
 
 
526 aa  77.8  0.0000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.630164  n/a   
 
 
-
 
NC_007575  Suden_1058  response regulator receiver domain-containing protein  33.07 
 
 
181 aa  78.2  0.0000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.0000718409  n/a   
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  36.79 
 
 
229 aa  77  0.0000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_013512  Sdel_0705  response regulator receiver  30.16 
 
 
231 aa  75.1  0.000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00025775  n/a   
 
 
-
 
NC_007575  Suden_1880  two component transcriptional regulator  30.97 
 
 
223 aa  75.1  0.000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3580  response regulator receiver protein  34.23 
 
 
564 aa  75.1  0.000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0106  response regulator receiver  37.39 
 
 
218 aa  73.9  0.000000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0892  response regulator receiver  28.57 
 
 
233 aa  73.9  0.000000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  32.74 
 
 
226 aa  73.6  0.000000000006  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_013595  Sros_6806  response regulator receiver protein  30.7 
 
 
238 aa  72.8  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.846374  normal 
 
 
-
 
NC_010814  Glov_2422  response regulator receiver protein  31.97 
 
 
137 aa  72.8  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  26.96 
 
 
246 aa  71.6  0.00000000002  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  27.46 
 
 
222 aa  72  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_05980  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  32 
 
 
230 aa  72  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.553702 
 
 
-
 
NC_009715  CCV52592_1547  cytochrome c biogenesis protein  36.89 
 
 
220 aa  72.4  0.00000000002  Campylobacter curvus 525.92  Bacteria  normal  0.0873939  n/a   
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  30.97 
 
 
222 aa  71.6  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  26.81 
 
 
242 aa  72  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.114994 
 
 
-
 
NC_013947  Snas_4021  two component transcriptional regulator, winged helix family  28.95 
 
 
235 aa  72  0.00000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  30.7 
 
 
223 aa  71.6  0.00000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0347  PAS  28.98 
 
 
513 aa  71.2  0.00000000003  Dechloromonas aromatica RCB  Bacteria  normal  unclonable  0.000000072068 
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  33.59 
 
 
388 aa  71.6  0.00000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0448  response regulator receiver  28.81 
 
 
224 aa  71.2  0.00000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.00000000838603  n/a   
 
 
-
 
NC_009715  CCV52592_1144  two component transcriptional regulator  30.77 
 
 
225 aa  71.2  0.00000000003  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  28.95 
 
 
244 aa  71.2  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.132168 
 
 
-
 
NC_007517  Gmet_0778  response regulator receiver domain-containing protein  36.61 
 
 
142 aa  70.9  0.00000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0748  PAS sensor protein  29.55 
 
 
647 aa  70.9  0.00000000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  30.97 
 
 
222 aa  70.9  0.00000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2485  two component transcriptional regulator, winged helix family  27.78 
 
 
243 aa  70.5  0.00000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0835  two component transcriptional regulator, winged helix family  31.86 
 
 
222 aa  70.5  0.00000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.0000000540746 
 
 
-
 
NC_002939  GSU0280  Fis family transcriptional regulator  27.27 
 
 
450 aa  69.7  0.00000000008  Geobacter sulfurreducens PCA  Bacteria  normal  0.928901  n/a   
 
 
-
 
NC_013131  Caci_7401  two component transcriptional regulator, winged helix family  31.73 
 
 
229 aa  69.7  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.263718  normal 
 
 
-
 
NC_011312  VSAL_I2520  hybrid sensory histidine kinase BarA  36.79 
 
 
929 aa  68.9  0.0000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.314221  n/a   
 
 
-
 
NC_013061  Phep_2648  response regulator receiver  37.04 
 
 
1363 aa  68.6  0.0000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1230  two component transcriptional regulator, winged helix family  26.23 
 
 
254 aa  68.6  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211629  normal  0.177188 
 
 
-
 
NC_013235  Namu_4223  two component transcriptional regulator, winged helix family  33.64 
 
 
226 aa  68.6  0.0000000002  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000102305  normal  0.0938221 
 
 
-
 
NC_009511  Swit_2954  two component transcriptional regulator  28.57 
 
 
226 aa  68.9  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.120358 
 
 
-
 
NC_011899  Hore_16930  response regulator receiver protein  37.62 
 
 
117 aa  68.6  0.0000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0310  two component transcriptional regulator  29.57 
 
 
223 aa  68.2  0.0000000002  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.859655 
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  26.19 
 
 
232 aa  68.2  0.0000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal 
 
 
-
 
NC_010001  Cphy_0015  two component transcriptional regulator  31.9 
 
 
228 aa  67.4  0.0000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  29.2 
 
 
245 aa  67.8  0.0000000004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_012803  Mlut_18360  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  26.4 
 
 
239 aa  67.8  0.0000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0749  two component transcriptional regulator  31.03 
 
 
230 aa  67.4  0.0000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  32.56 
 
 
509 aa  67.4  0.0000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  29.57 
 
 
365 aa  67.4  0.0000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_04920  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  26.4 
 
 
222 aa  67.4  0.0000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  29.2 
 
 
245 aa  67.4  0.0000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal 
 
 
-
 
NC_007519  Dde_1723  response regulator receiver (CheY-like) modulated serine phosphatase  30.7 
 
 
381 aa  67  0.0000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00833768  n/a   
 
 
-
 
NC_007604  Synpcc7942_1404  two component transcriptional regulator  22.97 
 
 
229 aa  67.4  0.0000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  0.153238  normal 
 
 
-
 
NC_009802  CCC13826_1869  NAD(P)H-flavin oxidoreductase  27.35 
 
 
229 aa  67.4  0.0000000005  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2129  response regulator receiver protein  33.91 
 
 
118 aa  67  0.0000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  30 
 
 
231 aa  67  0.0000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_014210  Ndas_0299  two component transcriptional regulator, winged helix family  31.25 
 
 
231 aa  67  0.0000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.867846 
 
 
-
 
NC_014210  Ndas_4670  two component transcriptional regulator, winged helix family  26.61 
 
 
234 aa  67  0.0000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1135  two component transcriptional regulator, winged helix family  31.9 
 
 
227 aa  67  0.0000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_2344  AraC family DNA-binding response regulator  36.17 
 
 
507 aa  67  0.0000000006  Clostridium perfringens ATCC 13124  Bacteria  normal  0.627636  n/a   
 
 
-
 
NC_014165  Tbis_3089  winged helix family two component transcriptional regulator  35.29 
 
 
224 aa  67  0.0000000006  Thermobispora bispora DSM 43833  Bacteria  normal  0.136258  normal 
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  27.2 
 
 
225 aa  67  0.0000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_011769  DvMF_1544  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.19 
 
 
739 aa  67  0.0000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.498595 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  35.29 
 
 
218 aa  66.6  0.0000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3688  response regulator receiver protein  29.41 
 
 
564 aa  66.6  0.0000000007  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  28.93 
 
 
226 aa  66.6  0.0000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2749  response regulator receiver domain-containing protein  33.9 
 
 
436 aa  66.6  0.0000000007  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  28.21 
 
 
230 aa  66.6  0.0000000007  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  28.21 
 
 
230 aa  66.6  0.0000000007  Mycobacterium sp. JLS  Bacteria  normal  normal  0.354926 
 
 
-
 
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