Gene Glov_1899 details

Gene Information

• Locus tag: Glov_1899
• ID: 6366840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter lovleyi SZ
• Kingdom: Bacteria
• Replicon accession: NC_010814
• Strand: +
• Start bp: 2023146
• End bp: 2024996
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642677307
• Product: response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor
• Protein accession: YP_001952135
• Protein GI: 189424958
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.764058
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGTTC ATCCGATAAC CGGCGATAGT TCTTCGCTGG TTGAATTACG CGAAATTTCA 
ATCCTCTTTG CTGAAGACGA CACCAGTGTC CGCACCCATA TTTCGCGGAT GCTGACGCCG 
GTCTGCGGTG AACTGTACAC GGCAGAAAAT GGTCGTGTTG CCCTTGATCT GTTCAGGAAG 
AAAATGCCGG ACCTGGTCCT GACCGATATT ACCATGCCGG CCATGACCGG TCTTGATCTG 
GCTCGCCAGA TCAAGCTGGA ACGTCCGGCA GTACCGGTTA TCATCATTTC ATCCCACGAC 
GATTCTGAGC ACCTGCTGCA GGCTATTAAT CTTCACCTTG ACGGTTACCT GACAAAACCT 
CTCAACGTTC AGAAGCTGTT TGCCAATCTT CAGCAGCAGG CAATGTTGCT ACGTGCCCGT 
CGGCTTGCCA GCCAGCAGTC CAGGCTTTTG TCCGGTGTCA ATATGGCCAT TCAATACCTC 
TTGTCCGCTG ATGCCAATCA GGATGCGGTC GATTTTGCAC TGCAGGAAAT GGCCAAGGCC 
GCCCGGGCCG ACAAAATTTT CCTTTATCAC TATCAGAATG CAGTGCTGGG TGACCGTGAA 
GTTTCCTTGA TCAGTGGTTT CGCCGGAGGG GAGATGGTTC TGCGCTTTCT TGATGGTGCC 
GAGCCGGATA TGCCTGAGCT GCCGTACCTT GAGCGTTGGT ACGGCCTTCT TTCACAAGGT 
AAATCAATTT CTGGCCCCCG TTCAGCTTTC CCGTCGGAAG AGCGCCATAT ACTGGATACC 
ATGCGGGTAC GCTCGATGCT GCTGACTCCT ATTTTTGAGG AGGGTAATCT GTGGGGTTTT 
GCCTGCCTCT GTGATATGAA ACGGGAACGC CCCTGGTCAG ACGCCGAGAC TTCAGTGGTG 
ATGACTGCGG CACGGGGACT GGGCAGTTTC ATGGGGCGTC TCAAGCTGGA AGAGGAACGT 
CTTGAGGCAC GCAAATCACT TGAACTTGCC AATACGCAAT GGCGTGAAAC CTTTGATACA 
ATCCCTGATA TGGTCATGGT CTTGGATACC TCACACCAGA TTGTACATAT CAACAAGGCC 
GCAAGAGAAC GCCTGAACAT CGGTGAATCC GGCCCCCAAA GCCTGATCGG CCCCTGCTTT 
CAGCATGTAC ATGGAGCAAG CCACCCCCTG CAGGGCTGTC CCCACAGTGC CCTGCTGAAA 
GACCATCAAC CCCATGAGAC AGAGGTTCAT ATTCCACATA TGAACAGCTA CTTTCATATT 
ACGGTCAATC CAACCTTTGA TGGGGATGGC AATCTGGTCG GTGCTGTCCA TGTGGCTCGT 
GATGTTACCA AACGGCGTGA AATGGAAGAC CGGTTGCGGT ACCTCAGTAC CCATGACGAA 
ATGACCAAGC TGTATAACCG CGCTTTTTTT GAAGCCGAAA TTGAGCAGCT TGAAAAGGGT 
CGCGTGGCTC CGTTATCGGT GGTCATTGCT GATCTTGACG GACTGAAAGA AGCGAACGAC 
CGTTTTGGCC ATGATGTCGG TGATGGCTTG ATCAGGGCTG CTGCAGATCT TCTGCGGGAG 
ATTTTTCGGG CTGGTGATGC CATTGCCAGG ATAGGTGGAG ATGAGTTTGC CGTGATCCTG 
AAAGGGGTGG GGGAAGAACT GCTTGCCACC ATTATGGAAC GGGCGCGCCA GATGCTTGAG 
GAAGGCGGTC ATCAGTCTGA ACATGGTCTG AAGGTCCGCT TCTCTCTGGG TAGTGCCACA 
ACCGGCTTTC CTGCTCGTCT TCAGGATGCG ATCAGAGAGG CGGATATGGC CATGTATGAA 
GATAAGAAGG CTCGTAAGCT GAAAGAAAAC GAACTCTCAG AATTCGCCTG A 

 

Protein sequence

MAVHPITGDS SSLVELREIS ILFAEDDTSV RTHISRMLTP VCGELYTAEN GRVALDLFRK 
KMPDLVLTDI TMPAMTGLDL ARQIKLERPA VPVIIISSHD DSEHLLQAIN LHLDGYLTKP 
LNVQKLFANL QQQAMLLRAR RLASQQSRLL SGVNMAIQYL LSADANQDAV DFALQEMAKA 
ARADKIFLYH YQNAVLGDRE VSLISGFAGG EMVLRFLDGA EPDMPELPYL ERWYGLLSQG 
KSISGPRSAF PSEERHILDT MRVRSMLLTP IFEEGNLWGF ACLCDMKRER PWSDAETSVV 
MTAARGLGSF MGRLKLEEER LEARKSLELA NTQWRETFDT IPDMVMVLDT SHQIVHINKA 
ARERLNIGES GPQSLIGPCF QHVHGASHPL QGCPHSALLK DHQPHETEVH IPHMNSYFHI 
TVNPTFDGDG NLVGAVHVAR DVTKRREMED RLRYLSTHDE MTKLYNRAFF EAEIEQLEKG 
RVAPLSVVIA DLDGLKEAND RFGHDVGDGL IRAAADLLRE IFRAGDAIAR IGGDEFAVIL 
KGVGEELLAT IMERARQMLE EGGHQSEHGL KVRFSLGSAT TGFPARLQDA IREADMAMYE 
DKKARKLKEN ELSEFA