| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2096 |
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| Symbol | |
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| ID | 8137432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2433654 |
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| End bp | 2436515 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869711 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003021906 |
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| Protein GI | 253700717 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0000000000903564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCTT TGAACCGGCC GTTGAAGGAT ATCTCGCTCT TGCTGGTCGA GGACGAAGTC
GAGGCGCGGG ACATGCTGGA ACGGATGCTC GGCCTCAACT ACCAGGGTGT GAAGATATAC
ACCGCCGACA ACGGGGTGAG CGGCCTTGAG GTCTTCCGCC GGTTACGGCC CGAGATCGTG
GTCACCGACA TCAACATGCC GCAGATGAAC GGCATCGCCA TGGCGCGCGG GATCAAGGAA
CTCGAACCCG AGGCTACTAT CGTCGCCGTG ACCGCCCACA GCGAGACCTC TTATCTCTTG
AGCGCCATCG AGATCGGCAT GGACCATTAC GTGCTGAAGC CGGTGAACTA CCCGGAACTC
TTCCACGTGC TGGACCGCAT AGCCGAAAAG ATCATGCTGA AGCGCCTGGT TTCCGAGCAG
GTGGAGCGTA TCCGGCGCAG GGAGCAGCAG CTCTCCCAGG CGGAGAGAAT CACACACCTG
GGAAGCTGGG AGTGGAACCT GGAGAGCGGA GAAACGGTCT GGTCCGACGA ACTGTACCGG
ATCCTGGGGC TTGAGCCGGA GAGCGTTGCG GCGACCTTCG AGTCGCTTTT GCGGATGGTG
CACCCGGCCG ACCGGGAGAC CATGGAAAAA GCGGTTCAGC AACTGCGCGA GACCGGCAGC
GCCCTGGGAA TCCAATACTA CCGGCTGCTG CGCGCCGACG GCGAGACCCG GATCGTGCGC
GGCCAGCTCG AGTCGGTGCG GGACGGCAGC GGCCGGCAGA CGGTGATCGG CGCCTGCCAC
GACGTCACCG AGCTCAAATG GGCCGAGGCA GCCCTGCGCG CCTCGGAGCG GCGCTTTTCC
AAGATATTCC AGGCGACCCC GGACCTTTTG AGCATCACGA GTCTTAAGGA CGGGACCATT
CTGGAGGTGA ACGAGGCCTT CCTGCGCGTC CTCGGTTACC AGCGCCAGGA GGTGATCGGC
ACCTACGCCG GGGAGCTTGG GCTTTGGGCC GACTCGGATC AGCCGGCGGC CCTTTTGCAG
CAGCTTGAGG AGCGGGGCGA GGTGCGGGAC ATCGAGGTGC GGCTCAAGGG GAGAAACGGC
CGGGAGCTCG AGGGGCTTGT GTCGGCCGAG CTGATCGAAA TCAACGGCAA CCCCTACCTC
CTCACGCTCT TCAAGGACAT CAGCGAAAGA AAGAGGCTAG AGGAGGACCG GGCGCGGCTT
GCCGCAATAG TGGAATCCTC CGACGACGCC ATCATGGCCG TGGACCGCGA GGGGGCCATC
ACCAGCTGGA ACGCCGGGGC CGAAAAGATG TTCGGCTATT GCGCCCAGGA CATGAAAGGG
GTGCACCTCT CGTTCCTGGT TTCCCCTGAG AAAAAGGAGC AGGTCACCTG CCTCAACGAC
GGCATCCGCA GCGACGGCGC GGTCACCCAC TGCGAGGTGG TGCACGTGAC CCGCGGGGGG
AGCCAGATCT ACGTCTCCCT CACAATGTCC CCCATCAAAA GCGCCGACGG CGGCATCGTC
GGGACCTCCT GCATCGCGCG CGACGTCACC GAGCGCACCC GCATGGAAGA GATCATCAAG
CACCAGGCCC AGCACGACAC CCTGACCGAT CTCCCCAACC GCAAGCTCTT CGGCGATTTC
CTCAACCTGG AGTTGGCCCA GGCGCGCCGC AACAGAAAGA GCCTCGCCGT GCTCTTCATG
GACCTGGACC ACTTCAAAAA GGTGAACGAC TCCCTGGGGC ACGCGGCGGG GGACCGTCTG
CTGCAGGCGG TGGCGCAAAG GTTGAAGCGC TGCGTCCGCG AGTCGGACAC CGTGGCGCGC
ATAAGCGGCG ACGAGTTCAA CGTCCTCATG CCGGACCTGA CCCAGACCGA CGACGTCGGC
ATCGTGGTCG GCAAGATCAT GGGGGTGTTC CGGACCCCGT TCGTCCTTGA GGGGGCGGAG
CTGAAGGTGA CCACCAGCGT CGGCGTGAGC ATGTTCCCGG ACGACGGCGA CTCGGCCCAG
GAACTTCTGC AAAAGGCCGA CGGCGCCATG TACGTCGCGA AACAGACCCC CGGCAACAGC
TACCAGTTCT ACAACGGCGA GATCAACGCC CGTACCGTGG CCAGGCAGAA CATGGAGCGC
CGCCTGCGCG AGGCGGTGTC CAAAGACGAG CTGGATCTGG TCTACCAGCC GCTATTGAGC
CTTGAGTCGG GGGAGATCGT CGGGGCGGAG GCCCTTTTGC GCTGGCATCA TCCCGAGCAT
GGGCTATTGC TCCCTGCGCA GTTTCTTCCG GTCGCCGAGG AGACCGGTGC CATCGTCCCC
ATCGGGGAGT GGGTCCTCTT CAACGCCTGC CGTCAGATGC GCCTGTGGCA GAGCCAGGGG
TTCGACTTAA GCGTGGCGGT GAACCTCTCC AACCGCGAGT TCCACCAGCC GAACTTCATC
GACCTGGCCA TGCGCGCCCT CTCCCAAAGC GGCCTCGATC CCGCCTCCCT GGAGCTGGAC
GTCACCGAGA AGGCGATCAT GGACAACCCC GCGTTCTCGC TGCGCAACAT GCGCCGGCTG
ACCGACATCG GCGTCGCCTT CTCGGTGGAC GACTTCGGAG TCGGCGCCTC CTCCCTTTCC
CGGATCAAGG AACTCCCCAT CGCCAAGGTC AAGATCGACC GCAGCTTCAT CAGGGACATC
CTCACCGAGC CAAACGACCT CGACGTGGTC TCCGCGGTCA TCTGCATGTC GCACAGCCTC
AAGATGCGGG TCAACGCGGT CGGGGTCGAG TCCGCCGAGC AACTCGCCTT GGTCGGCAGT
TTCGGCTGCG ACGAGGTGCA GGGGGACCTG ATCAGCAGGC CGCTTCCCCC GCACGAGTTC
GAGCGCCTGT TGGTGGAGGG AGGCGTTCAT GCCGAATTCT GA
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| Protein sequence | MEPLNRPLKD ISLLLVEDEV EARDMLERML GLNYQGVKIY TADNGVSGLE VFRRLRPEIV
VTDINMPQMN GIAMARGIKE LEPEATIVAV TAHSETSYLL SAIEIGMDHY VLKPVNYPEL
FHVLDRIAEK IMLKRLVSEQ VERIRRREQQ LSQAERITHL GSWEWNLESG ETVWSDELYR
ILGLEPESVA ATFESLLRMV HPADRETMEK AVQQLRETGS ALGIQYYRLL RADGETRIVR
GQLESVRDGS GRQTVIGACH DVTELKWAEA ALRASERRFS KIFQATPDLL SITSLKDGTI
LEVNEAFLRV LGYQRQEVIG TYAGELGLWA DSDQPAALLQ QLEERGEVRD IEVRLKGRNG
RELEGLVSAE LIEINGNPYL LTLFKDISER KRLEEDRARL AAIVESSDDA IMAVDREGAI
TSWNAGAEKM FGYCAQDMKG VHLSFLVSPE KKEQVTCLND GIRSDGAVTH CEVVHVTRGG
SQIYVSLTMS PIKSADGGIV GTSCIARDVT ERTRMEEIIK HQAQHDTLTD LPNRKLFGDF
LNLELAQARR NRKSLAVLFM DLDHFKKVND SLGHAAGDRL LQAVAQRLKR CVRESDTVAR
ISGDEFNVLM PDLTQTDDVG IVVGKIMGVF RTPFVLEGAE LKVTTSVGVS MFPDDGDSAQ
ELLQKADGAM YVAKQTPGNS YQFYNGEINA RTVARQNMER RLREAVSKDE LDLVYQPLLS
LESGEIVGAE ALLRWHHPEH GLLLPAQFLP VAEETGAIVP IGEWVLFNAC RQMRLWQSQG
FDLSVAVNLS NREFHQPNFI DLAMRALSQS GLDPASLELD VTEKAIMDNP AFSLRNMRRL
TDIGVAFSVD DFGVGASSLS RIKELPIAKV KIDRSFIRDI LTEPNDLDVV SAVICMSHSL
KMRVNAVGVE SAEQLALVGS FGCDEVQGDL ISRPLPPHEF ERLLVEGGVH AEF
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