Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_0299 |
Symbol | |
ID | 9244133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 372558 |
End bp | 373253 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003678254 |
Protein GI | 297559280 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.867846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTCC TGGTCGTTGA CGACGACATG CAGATCATTC GGGCCATGCG GATCAACCTG AGGGCGCGCG GGCACGACGT GGACACCGCG GCCGACGGGG CGTCCGCTCT GCGGCTGGCC GCGGACAACC ACCCCGACGT GGTCCTGCTC GACCTGGGGC TGCCCGACAT GGAGGGCATG GAGGTCATAC AGCGGCTGCG CGGGTGGTCT CAGGTGCCGA TCATCGTGCT GTCGGCGCGG CACTCGGCCG GGGAGAAGGT GCGCTGCCTG GACTCGGGCG CCGACGACTA CGTCACCAAG CCGTTCGGGA TGGACGAGCT GCTGGCGCGC ATGCGCGCGG CGGAGCGGCG GTCGGTGCGC GTGGACGAGG CCCCGGTGGT GCGCACGCCC TCCTTCACCG TGGACCTGGG CGCCAAGCGG GTGCTGCGGG AGGGCGAGGA GGTCCGGCTC ACCCCGACGG AGTGGCACAT CCTGGAGATC CTGGCCCGGC ACGCGGGCCA GCTGGTCAGC CAGCGCCAGC TGCTGCACGA CGTGTGGGGC CCGGCCTACC AGAGCGAGAC CAACTACCTG CGGGTGTACA TGGCGCAGTT GCGCCGCAAG CTGGAGCCCG ACCCGGCGTG CCCGCGCTAC CTGATCACGG AGGCGGGCCG GGGCTACCGC TTCGAGAGGG CGGGCTCGGC CCAGCCCGGG GACTGA
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Protein sequence | MRVLVVDDDM QIIRAMRINL RARGHDVDTA ADGASALRLA ADNHPDVVLL DLGLPDMEGM EVIQRLRGWS QVPIIVLSAR HSAGEKVRCL DSGADDYVTK PFGMDELLAR MRAAERRSVR VDEAPVVRTP SFTVDLGAKR VLREGEEVRL TPTEWHILEI LARHAGQLVS QRQLLHDVWG PAYQSETNYL RVYMAQLRRK LEPDPACPRY LITEAGRGYR FERAGSAQPG D
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