Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4670 |
Symbol | |
ID | 9248552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5546334 |
End bp | 5547038 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003682562 |
Protein GI | 297563588 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGCGCGC ATGTGCTGGT CGCCGAGGAC GACGTCAACC AGGCCGACCT GATCCGGCGC TACCTGGAGC ACGAGGGGCA CTTCGTCCGC GTCGTGCACG ACGGGCGCGC GGCGGTCGCG GCGCACCACC GGGACCGCCC CGACCTGGTC GTCCTCGACG TGATGATGCC GGTCATGAGC GGACTCGACG CGTGCCGGGC CCTGCGGGCG GAGTCCGACG TGGCGGTGCT GATGCTCACC GCCCGCTCCA CCGAGGAGGA CCTGCTCACC GGGCTCGACC TGGGCGCGGA CGACTACGTC ACCAAGCCCT ACAGTCCGCG TGAGCTGATG GCGCGGGTGC GCACGCTGCT GCGCCGCTCG CGCAGGGATC CCGACGACGC GGACCGGGTG CTGCGCGCGG GTCCGGTCGC GGTGGACCCG TCGCGCCACG CGGTGCGGGT GGACGGGGTC CCGGTCACGT GCACGCCAGC CGAGTTCCAA CTGCTCGCCG CGCTCGCCGC CCAGCCGGGC CGGGTCCTGA CGCGCGCCCA GCTGTTGGAG CACATCCACG GCATGAGCCG GTTCATCACC GAGCGCACCA TCGACGTACA CGTGAAGAAC CTGCGCCGGA AGCTGGAGCC GGACCCGCGC AGGCCGGTGC GGCTGGTCAC CGTGTACGGC GTGGGCTACA AGCTCGTCGG GAAGACCGAT GACCGGTCGG CGTAG
|
Protein sequence | MCAHVLVAED DVNQADLIRR YLEHEGHFVR VVHDGRAAVA AHHRDRPDLV VLDVMMPVMS GLDACRALRA ESDVAVLMLT ARSTEEDLLT GLDLGADDYV TKPYSPRELM ARVRTLLRRS RRDPDDADRV LRAGPVAVDP SRHAVRVDGV PVTCTPAEFQ LLAALAAQPG RVLTRAQLLE HIHGMSRFIT ERTIDVHVKN LRRKLEPDPR RPVRLVTVYG VGYKLVGKTD DRSA
|
| |