More than 300 homologs were found in PanDaTox collection
for query gene Xcel_2485 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_2485  two component transcriptional regulator, winged helix family  100 
 
 
243 aa  477  1e-134  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  84.39 
 
 
244 aa  390  1e-107  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.132168 
 
 
-
 
NC_013174  Jden_1802  two component transcriptional regulator, winged helix family  84.51 
 
 
232 aa  384  1e-106  Jonesia denitrificans DSM 20603  Bacteria  normal  0.150286  normal 
 
 
-
 
NC_014151  Cfla_1221  two component transcriptional regulator, winged helix family  77.78 
 
 
256 aa  345  3e-94  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.655279  normal 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  76.72 
 
 
242 aa  345  5e-94  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.114994 
 
 
-
 
NC_009664  Krad_1230  two component transcriptional regulator, winged helix family  71.67 
 
 
254 aa  329  3e-89  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211629  normal  0.177188 
 
 
-
 
NC_010816  BLD_0753  putative response regulator  67.67 
 
 
240 aa  316  2e-85  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_19400  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  71.56 
 
 
279 aa  312  2.9999999999999996e-84  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0470356  n/a   
 
 
-
 
NC_013721  HMPREF0424_0596  response regulator receiver domain protein  62.61 
 
 
250 aa  292  4e-78  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_5525  two component transcriptional regulator, winged helix family  67.39 
 
 
234 aa  287  1e-76  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.997238 
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  64.47 
 
 
225 aa  286  2.9999999999999996e-76  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  63.84 
 
 
226 aa  273  1.0000000000000001e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1549  response regulator receiver protein  63 
 
 
241 aa  270  2e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0273908  normal 
 
 
-
 
NC_013131  Caci_7562  two component transcriptional regulator, winged helix family  57.98 
 
 
273 aa  266  2.9999999999999995e-70  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.320599  normal 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  54.35 
 
 
230 aa  206  3e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_009380  Strop_4477  response regulator receiver  51.97 
 
 
228 aa  201  9e-51  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0220713 
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  47.83 
 
 
233 aa  199  5e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  52.4 
 
 
235 aa  198  6e-50  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal 
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  47.37 
 
 
257 aa  197  2.0000000000000003e-49  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  49.56 
 
 
227 aa  196  2.0000000000000003e-49  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_010718  Nther_0916  two component transcriptional regulator, winged helix family  41.18 
 
 
234 aa  195  5.000000000000001e-49  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0276045  hitchhiker  9.727110000000001e-18 
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  45.53 
 
 
236 aa  193  2e-48  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  46.32 
 
 
239 aa  193  2e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  46.32 
 
 
239 aa  193  2e-48  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  46.32 
 
 
239 aa  193  2e-48  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  46.32 
 
 
239 aa  193  2e-48  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  46.32 
 
 
239 aa  193  2e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  46.32 
 
 
239 aa  193  2e-48  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  46.32 
 
 
239 aa  193  2e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  46.32 
 
 
239 aa  193  2e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  45.89 
 
 
236 aa  192  3e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  43.51 
 
 
273 aa  192  4e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal 
 
 
-
 
NC_011831  Cagg_2709  two component transcriptional regulator, winged helix family  50 
 
 
236 aa  192  5e-48  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0011921  normal 
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  45.89 
 
 
239 aa  192  6e-48  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  45.65 
 
 
238 aa  192  6e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  45.89 
 
 
239 aa  192  6e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  45.49 
 
 
234 aa  191  8e-48  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  45.99 
 
 
236 aa  191  9e-48  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  49.14 
 
 
230 aa  191  1e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal 
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  49.78 
 
 
233 aa  190  2e-47  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  42.74 
 
 
233 aa  189  2.9999999999999997e-47  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  44.64 
 
 
230 aa  189  4e-47  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4990  two component transcriptional regulator  50.66 
 
 
228 aa  189  4e-47  Salinispora arenicola CNS-205  Bacteria  normal  0.866601  hitchhiker  0.000134834 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  45.37 
 
 
406 aa  189  5e-47  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  46.05 
 
 
228 aa  188  5e-47  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  43.67 
 
 
238 aa  188  5.999999999999999e-47  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  44.68 
 
 
239 aa  188  7e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08590  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.96 
 
 
239 aa  187  1e-46  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.857083 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  46.96 
 
 
225 aa  187  1e-46  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  46.09 
 
 
226 aa  187  2e-46  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  46.35 
 
 
239 aa  186  2e-46  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  44.44 
 
 
235 aa  186  3e-46  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  47.39 
 
 
235 aa  186  3e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  47.79 
 
 
228 aa  186  4e-46  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2476  two component transcriptional regulator  44.73 
 
 
241 aa  184  8e-46  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00000027247 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.43 
 
 
231 aa  184  1.0000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  43.59 
 
 
239 aa  184  1.0000000000000001e-45  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  43.59 
 
 
239 aa  184  1.0000000000000001e-45  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  43.78 
 
 
230 aa  184  1.0000000000000001e-45  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  43.29 
 
 
256 aa  184  1.0000000000000001e-45  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  45.61 
 
 
240 aa  183  2.0000000000000003e-45  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0114  two component transcriptional regulator  54.35 
 
 
229 aa  183  2.0000000000000003e-45  Roseiflexus sp. RS-1  Bacteria  normal  0.994086  normal 
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  42.98 
 
 
234 aa  183  2.0000000000000003e-45  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  42.98 
 
 
234 aa  183  2.0000000000000003e-45  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  47.01 
 
 
229 aa  183  2.0000000000000003e-45  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  45.37 
 
 
226 aa  183  2.0000000000000003e-45  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  46.61 
 
 
250 aa  183  3e-45  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  42.67 
 
 
245 aa  182  3e-45  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_007333  Tfu_2496  response regulator receiver  44.54 
 
 
225 aa  182  4.0000000000000006e-45  Thermobifida fusca YX  Bacteria  normal  0.491467  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.9 
 
 
229 aa  182  4.0000000000000006e-45  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008025  Dgeo_1522  two component transcriptional regulator  46.12 
 
 
227 aa  182  4.0000000000000006e-45  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  47.21 
 
 
230 aa  182  5.0000000000000004e-45  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  41.8 
 
 
252 aa  182  5.0000000000000004e-45  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  43.29 
 
 
245 aa  182  5.0000000000000004e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal 
 
 
-
 
NC_013552  DhcVS_926  two-component system, OmpR family, response regulator  45.81 
 
 
227 aa  182  6e-45  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00200634  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  44.92 
 
 
235 aa  182  6e-45  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2566  two component transcriptional regulator, winged helix family  49.56 
 
 
229 aa  182  6e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000356007  hitchhiker  0.00345607 
 
 
-
 
NC_013510  Tcur_4043  two component transcriptional regulator, winged helix family  45.18 
 
 
225 aa  181  8.000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.728877  n/a   
 
 
-
 
NC_008699  Noca_3782  response regulator receiver  48.48 
 
 
297 aa  181  8.000000000000001e-45  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4745  DNA-binding response regulator  45.61 
 
 
232 aa  181  1e-44  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4583  DNA-binding response regulator  45.61 
 
 
232 aa  181  1e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.510578  n/a   
 
 
-
 
NC_007530  GBAA_5106  DNA-binding response regulator  45.61 
 
 
232 aa  181  1e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3703  two component transcriptional regulator  43.61 
 
 
232 aa  181  1e-44  Saccharophagus degradans 2-40  Bacteria  normal  0.230236  normal  0.0884672 
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  44.59 
 
 
261 aa  181  1e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_009091  P9301_12431  two-component response regulator, phosphate  40.09 
 
 
242 aa  181  1e-44  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.15803  n/a   
 
 
-
 
NC_009921  Franean1_1612  two component transcriptional regulator  46.22 
 
 
259 aa  181  1e-44  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00249249  normal 
 
 
-
 
NC_009972  Haur_0905  two component transcriptional regulator  45.65 
 
 
238 aa  180  2e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4963  DNA-binding response regulator  45.61 
 
 
232 aa  180  2e-44  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.67 
 
 
226 aa  179  2e-44  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_009380  Strop_0967  response regulator receiver  46.9 
 
 
229 aa  180  2e-44  Salinispora tropica CNB-440  Bacteria  normal  0.359698  normal  0.873584 
 
 
-
 
NC_007577  PMT9312_0717  two component transcriptional regulator  40.09 
 
 
242 aa  180  2e-44  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  46.05 
 
 
225 aa  180  2e-44  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  45.06 
 
 
234 aa  180  2e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0218  two component transcriptional regulator  43.78 
 
 
239 aa  180  2e-44  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  46.93 
 
 
232 aa  180  2e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  42.79 
 
 
232 aa  179  2e-44  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  47.62 
 
 
231 aa  179  2.9999999999999997e-44  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  46.05 
 
 
225 aa  179  2.9999999999999997e-44  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  43.42 
 
 
228 aa  179  2.9999999999999997e-44  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  40.61 
 
 
236 aa  179  2.9999999999999997e-44  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
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