More than 300 homologs were found in PanDaTox collection
for query gene Ssed_0524 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009831  Ssed_0524  methyl-accepting chemotaxis protein  100 
 
 
367 aa  741    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  55.52 
 
 
361 aa  379  1e-104  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  53.39 
 
 
362 aa  363  3e-99  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3981  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
362 aa  344  1e-93  Marinomonas sp. MWYL1  Bacteria  normal  0.684526  normal  0.542266 
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  50.42 
 
 
362 aa  342  4e-93  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3397  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
362 aa  342  5e-93  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3522  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
362 aa  342  5e-93  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3301  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
362 aa  341  1e-92  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1055  methyl-accepting chemotaxis sensory transducer  50.14 
 
 
362 aa  341  1e-92  Shewanella baltica OS223  Bacteria  normal  0.0655525  hitchhiker  0.0000230906 
 
 
-
 
NC_004347  SO_1144  methyl-accepting chemotaxis protein  49.58 
 
 
362 aa  340  2.9999999999999998e-92  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
362 aa  334  1e-90  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
362 aa  333  2e-90  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  48.89 
 
 
360 aa  333  4e-90  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0970  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
362 aa  310  2e-83  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2964  methyl-accepting chemotaxis sensory transducer  47.89 
 
 
361 aa  303  2.0000000000000002e-81  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3483  putative methyl-accepting chemotaxis protein  33.22 
 
 
352 aa  175  9.999999999999999e-43  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3310  putative methyl-accepting chemotaxis protein  33.22 
 
 
352 aa  175  9.999999999999999e-43  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.740696  n/a   
 
 
-
 
NC_011094  SeSA_A3320  putative methyl-accepting chemotaxis protein  33.22 
 
 
351 aa  175  9.999999999999999e-43  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.781767  normal 
 
 
-
 
NC_011083  SeHA_C3384  putative methyl-accepting chemotaxis protein  33.22 
 
 
352 aa  175  9.999999999999999e-43  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.644477  normal  0.732859 
 
 
-
 
NC_011080  SNSL254_A3390  putative methyl-accepting chemotaxis protein  33.22 
 
 
351 aa  175  9.999999999999999e-43  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.927334 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  34.59 
 
 
360 aa  174  2.9999999999999996e-42  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2497  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
372 aa  166  8e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.854874 
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
442 aa  158  1e-37  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  37.89 
 
 
440 aa  144  3e-33  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  32.8 
 
 
365 aa  143  5e-33  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  32.8 
 
 
365 aa  142  7e-33  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
720 aa  141  1.9999999999999998e-32  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  34.72 
 
 
365 aa  135  9.999999999999999e-31  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  30.98 
 
 
720 aa  134  3e-30  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  28.76 
 
 
658 aa  134  3e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0416  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
366 aa  131  2.0000000000000002e-29  Thauera sp. MZ1T  Bacteria  normal  0.217637  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  32.36 
 
 
375 aa  130  3e-29  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
421 aa  130  5.0000000000000004e-29  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  34.51 
 
 
447 aa  128  1.0000000000000001e-28  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
632 aa  127  3e-28  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
483 aa  125  2e-27  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
635 aa  121  1.9999999999999998e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  29.08 
 
 
645 aa  117  3e-25  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0922  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
495 aa  114  3e-24  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
700 aa  113  5e-24  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  36.67 
 
 
360 aa  112  9e-24  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
674 aa  112  9e-24  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  34.38 
 
 
483 aa  112  1.0000000000000001e-23  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
700 aa  108  1e-22  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  27.69 
 
 
1170 aa  108  2e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  30.17 
 
 
361 aa  106  5e-22  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
356 aa  105  1e-21  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_0520  GntT protein  35.9 
 
 
306 aa  103  3e-21  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
622 aa  103  6e-21  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  47.06 
 
 
641 aa  101  2e-20  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_008740  Maqu_1216  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
452 aa  101  2e-20  Marinobacter aquaeolei VT8  Bacteria  normal  0.133682  n/a   
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  28.23 
 
 
777 aa  100  4e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  35.89 
 
 
357 aa  100  5e-20  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  40.65 
 
 
572 aa  99.8  7e-20  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
698 aa  99.4  8e-20  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_009654  Mmwyl1_1836  methyl-accepting chemotaxis sensory transducer  29.53 
 
 
359 aa  99.4  9e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.126283  normal  0.522282 
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  27.78 
 
 
483 aa  99  1e-19  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  40.37 
 
 
488 aa  97.4  4e-19  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  43.67 
 
 
458 aa  96.7  6e-19  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  54.37 
 
 
598 aa  95.9  9e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008599  CFF8240_1041  methyl-accepting chemotaxis protein  33.62 
 
 
731 aa  95.9  9e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.32701  n/a   
 
 
-
 
NC_002939  GSU1029  methyl-accepting chemotaxis protein  44 
 
 
549 aa  95.5  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.392996  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  44.7 
 
 
629 aa  95.5  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007520  Tcr_1436  methyl-accepting chemotaxis sensory transducer  45 
 
 
330 aa  95.9  1e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  43.65 
 
 
525 aa  95.5  1e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1679  methyl-accepting chemotaxis protein  35.27 
 
 
700 aa  95.1  2e-18  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  60.23 
 
 
598 aa  95.1  2e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_005945  BAS0544  methyl-accepting chemotaxis protein  39.27 
 
 
660 aa  94.7  2e-18  Bacillus anthracis str. Sterne  Bacteria  normal  0.0138447  n/a   
 
 
-
 
NC_009712  Mboo_1580  methyl-accepting chemotaxis sensory transducer  49.55 
 
 
967 aa  94.7  2e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0176673  normal  0.174359 
 
 
-
 
NC_007519  Dde_3508  methyl-accepting chemotaxis sensory transducer  45 
 
 
695 aa  94.7  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0575  methyl-accepting chemotaxis protein  39.27 
 
 
660 aa  94.7  2e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  39.46 
 
 
481 aa  95.1  2e-18  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  44.7 
 
 
632 aa  94.7  2e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  44.7 
 
 
632 aa  94.7  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  44.7 
 
 
629 aa  95.1  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009715  CCV52592_1961  putative DNA-binding response regulator  38.33 
 
 
421 aa  94.4  3e-18  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
541 aa  94.4  3e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_1498  methyl-accepting chemotaxis protein  35.27 
 
 
700 aa  94.4  3e-18  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.756421  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
640 aa  94.4  3e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009707  JJD26997_1858  methyl-accepting chemotaxis protein  35.27 
 
 
700 aa  94.4  3e-18  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3357  putative chemotaxis transducer  32.73 
 
 
431 aa  94  4e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0800566  n/a   
 
 
-
 
NC_005957  BT9727_0486  methyl-accepting chemotaxis protein  41.82 
 
 
660 aa  94  4e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0488  methyl-accepting chemotaxis protein  39.27 
 
 
660 aa  93.6  4e-18  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  44.7 
 
 
629 aa  94  4e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009712  Mboo_1578  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
663 aa  93.6  4e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.365209  normal  0.192344 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  44.7 
 
 
629 aa  94  4e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_011126  HY04AAS1_0311  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
553 aa  94  4e-18  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000172296  n/a   
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  56.79 
 
 
672 aa  94  4e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  53.49 
 
 
638 aa  93.6  5e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1234  methyl-accepting chemotaxis protein  32.64 
 
 
418 aa  93.6  5e-18  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
482 aa  93.2  6e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.92 
 
 
659 aa  93.2  6e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  43.38 
 
 
658 aa  92.8  8e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2969  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
440 aa  92.8  8e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0489  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.74 
 
 
650 aa  92.8  9e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
755 aa  92.4  1e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
566 aa  92  1e-17  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_012034  Athe_2304  methyl-accepting chemotaxis sensory transducer  40 
 
 
713 aa  92.4  1e-17  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  42.34 
 
 
561 aa  92  1e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_011899  Hore_03350  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
662 aa  92.4  1e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>