More than 300 homologs were found in PanDaTox collection
for query gene Sfri_2964 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_2964  methyl-accepting chemotaxis sensory transducer  100 
 
 
361 aa  731    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2936  methyl-accepting chemotaxis sensory transducer  49.72 
 
 
362 aa  322  9.000000000000001e-87  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1055  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
362 aa  313  3.9999999999999997e-84  Shewanella baltica OS223  Bacteria  normal  0.0655525  hitchhiker  0.0000230906 
 
 
-
 
NC_009052  Sbal_3301  methyl-accepting chemotaxis sensory transducer  47.9 
 
 
362 aa  311  9e-84  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3522  methyl-accepting chemotaxis sensory transducer  47.9 
 
 
362 aa  311  9e-84  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3397  methyl-accepting chemotaxis sensory transducer  47.9 
 
 
362 aa  311  9e-84  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1144  methyl-accepting chemotaxis protein  48.04 
 
 
362 aa  311  1e-83  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  48.31 
 
 
362 aa  310  2e-83  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
362 aa  307  1.0000000000000001e-82  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3981  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
362 aa  307  2.0000000000000002e-82  Marinomonas sp. MWYL1  Bacteria  normal  0.684526  normal  0.542266 
 
 
-
 
NC_008577  Shewana3_0970  methyl-accepting chemotaxis sensory transducer  56.12 
 
 
362 aa  307  2.0000000000000002e-82  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0524  methyl-accepting chemotaxis protein  47.89 
 
 
367 aa  303  2.0000000000000002e-81  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  43.73 
 
 
360 aa  278  1e-73  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  43.3 
 
 
361 aa  271  1e-71  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  41.62 
 
 
362 aa  267  2.9999999999999995e-70  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3390  putative methyl-accepting chemotaxis protein  35.03 
 
 
351 aa  196  4.0000000000000005e-49  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.927334 
 
 
-
 
NC_011205  SeD_A3483  putative methyl-accepting chemotaxis protein  35.03 
 
 
352 aa  196  4.0000000000000005e-49  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3384  putative methyl-accepting chemotaxis protein  35.03 
 
 
352 aa  196  4.0000000000000005e-49  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.644477  normal  0.732859 
 
 
-
 
NC_011094  SeSA_A3320  putative methyl-accepting chemotaxis protein  35.03 
 
 
351 aa  196  4.0000000000000005e-49  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.781767  normal 
 
 
-
 
NC_011149  SeAg_B3310  putative methyl-accepting chemotaxis protein  35.03 
 
 
352 aa  196  4.0000000000000005e-49  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.740696  n/a   
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  36.77 
 
 
360 aa  179  4.999999999999999e-44  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2497  methyl-accepting chemotaxis sensory transducer  40.89 
 
 
372 aa  162  8.000000000000001e-39  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.854874 
 
 
-
 
NC_007575  Suden_0283  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
442 aa  150  3e-35  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0447763  n/a   
 
 
-
 
NC_011662  Tmz1t_0416  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
366 aa  144  2e-33  Thauera sp. MZ1T  Bacteria  normal  0.217637  n/a   
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  36.82 
 
 
440 aa  137  4e-31  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  32.17 
 
 
365 aa  133  3.9999999999999996e-30  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  32.17 
 
 
365 aa  132  7.999999999999999e-30  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  36.71 
 
 
483 aa  129  7.000000000000001e-29  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  32.53 
 
 
365 aa  127  3e-28  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  36.51 
 
 
632 aa  126  7e-28  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0157  chemotaxis sensory transducer  34.26 
 
 
447 aa  124  2e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0930636  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
720 aa  122  9.999999999999999e-27  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0981  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
635 aa  121  1.9999999999999998e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.779847  n/a   
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  32.52 
 
 
421 aa  120  3e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
720 aa  120  3e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
471 aa  120  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_010730  SYO3AOP1_0922  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
495 aa  120  3e-26  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0367  chemotaxis sensory transducer  36.07 
 
 
483 aa  119  7.999999999999999e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.124323  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
815 aa  114  2.0000000000000002e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  33.59 
 
 
375 aa  112  8.000000000000001e-24  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
674 aa  110  3e-23  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  28.8 
 
 
645 aa  107  2e-22  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.37 
 
 
1170 aa  108  2e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  29.39 
 
 
622 aa  100  5e-20  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_009654  Mmwyl1_1836  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
359 aa  98.6  1e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.126283  normal  0.522282 
 
 
-
 
NC_009715  CCV52592_1961  putative DNA-binding response regulator  31.75 
 
 
421 aa  97.8  2e-19  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1216  methyl-accepting chemotaxis sensory transducer  31.98 
 
 
452 aa  98.2  2e-19  Marinobacter aquaeolei VT8  Bacteria  normal  0.133682  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
620 aa  97.8  3e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  30.14 
 
 
664 aa  96.3  7e-19  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  41.61 
 
 
488 aa  94.4  3e-18  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  40.14 
 
 
505 aa  93.6  5e-18  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0573  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
314 aa  93.6  5e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  37.29 
 
 
361 aa  93.2  6e-18  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  32.6 
 
 
360 aa  92.8  8e-18  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  32.54 
 
 
357 aa  92  1e-17  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  40.98 
 
 
538 aa  92  2e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_2764  chemotaxis sensory transducer  35.22 
 
 
310 aa  91.7  2e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.0417253  normal 
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  35.5 
 
 
547 aa  90.9  3e-17  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0219  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
484 aa  90.9  4e-17  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0569  methyl-accepting chemotaxis sensory transducer  30.14 
 
 
483 aa  90.5  4e-17  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0283  methyl-accepting chemotaxis sensory transducer  53.19 
 
 
420 aa  90.1  5e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_1507  methyl-accepting chemotaxis sensory transducer  53.66 
 
 
762 aa  90.1  6e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.463366  n/a   
 
 
-
 
NC_011830  Dhaf_1122  methyl-accepting chemotaxis sensory transducer  54.22 
 
 
396 aa  90.1  6e-17  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00175946  n/a   
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  29.39 
 
 
678 aa  89.7  7e-17  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_008789  Hhal_2165  methyl-accepting chemotaxis sensory transducer  29.19 
 
 
470 aa  89.7  8e-17  Halorhodospira halophila SL1  Bacteria  normal  0.623772  n/a   
 
 
-
 
NC_009616  Tmel_1579  methyl-accepting chemotaxis sensory transducer  53.16 
 
 
565 aa  89.4  8e-17  Thermosipho melanesiensis BI429  Bacteria  normal  0.327894  n/a   
 
 
-
 
NC_009674  Bcer98_0849  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
573 aa  89.7  8e-17  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  43.28 
 
 
678 aa  89.4  9e-17  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  37.71 
 
 
458 aa  89.4  9e-17  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
566 aa  89.4  9e-17  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_013522  Taci_1590  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
433 aa  89.4  9e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  36.24 
 
 
554 aa  89.4  9e-17  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
675 aa  89.4  9e-17  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4500  methyl-accepting chemotaxis protein  50 
 
 
467 aa  88.6  1e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000193555 
 
 
-
 
NC_011126  HY04AAS1_0311  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
553 aa  88.6  1e-16  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000172296  n/a   
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
675 aa  89.4  1e-16  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  36 
 
 
356 aa  89  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01085  methyl-accepting chemotaxis protein  49.49 
 
 
672 aa  89  1e-16  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0241745  n/a   
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  43.48 
 
 
648 aa  88.6  1e-16  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_009253  Dred_1557  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
530 aa  89  1e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
572 aa  89  1e-16  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  48.24 
 
 
659 aa  88.2  2e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0285  methyl-accepting chemotaxis sensory transducer  38.69 
 
 
411 aa  87.8  2e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3052  methyl-accepting chemotaxis protein  46.23 
 
 
579 aa  88.2  2e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  48.51 
 
 
629 aa  87.8  2e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  40 
 
 
476 aa  88.2  2e-16  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
648 aa  88.2  2e-16  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
548 aa  88.6  2e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
554 aa  87.8  2e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
566 aa  88.2  2e-16  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3723  HAMP domain-containing protein  37.59 
 
 
628 aa  88.2  2e-16  Cupriavidus metallidurans CH34  Bacteria  normal  0.21159  normal  0.539738 
 
 
-
 
NC_008043  TM1040_3194  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
614 aa  88.2  2e-16  Ruegeria sp. TM1040  Bacteria  normal  0.311641  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.46 
 
 
511 aa  88.6  2e-16  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4081  methyl-accepting chemotaxis protein  52.63 
 
 
556 aa  88.2  2e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1008  methyl-accepting chemotaxis sensory transducer  47.12 
 
 
574 aa  88.2  2e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1751  methyl-accepting chemotaxis sensory transducer  30.25 
 
 
739 aa  87.8  2e-16  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000403913  n/a   
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  49.45 
 
 
698 aa  88.2  2e-16  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_008700  Sama_0643  putative methyl-accepting chemotaxis sensory transducer  43.95 
 
 
478 aa  88.2  2e-16  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000131612  normal 
 
 
-
 
NC_003912  CJE1324  methyl-accepting chemotaxis protein  35.12 
 
 
459 aa  87.8  3e-16  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  51.85 
 
 
598 aa  87.8  3e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
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