| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0524 |
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| Symbol | |
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| ID | 5613754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 639199 |
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| End bp | 640302 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931369 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001472264 |
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| Protein GI | 157373664 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTCA ATAACGGACT AAAACAAGAG AATGCGGCAT TAAAACAGCA GCTTCAGGAA
TTGAAAGATA AGCATGATCA AGAGATAAAG GAGCTTGTCG AAGAGTTAAA AAGAAAGGAT
TTCGAACATA ATAAATTACA TCAGGAGCAA CAGCTCGACG CCACTCTGAT AACGAGTAAC
CTTAGGGGCG GAAGAATGCT GGAAACCATC CGCACAGGAC TCGCGAATAG CGCTGAAGAG
CTGATCCATG AAAATGAAGA GCTCAAGCAA CTCGATGAGA TGTTTGCCCA AACCCATACA
GCACTCAGCC AACTTGAAGC CCGCGCTCAA AAAATAAGTG AACAAACCGA TAGCACGATG
AACTCAGCGA CGGCCTTAGA TGAGACGGCT AAATCAATAG GCCAGCTTAT CGTCGCGATA
CAGGACATTT CTTCGCAGAC TAACCTGCTT GCGCTTAATG CCGCCATTGA GGCCGCACGT
GCCGGCGAAG CCGGACGAGG CTTTGCCGTG GTTGCCGATG AGGTGCGCAC CCTCGCGGGG
AATGCCCACG AGGCCAGTGA CAAGATAGAG AGACTGGTCA ATCGAGTTTT AGGGCAAACT
CATGAGATAA AAACATCAAT TAGTGAAAAC CAATTGTATG CAGCTGATAT ATCGGCATCT
TCTGAACAGA TAGATGTTAT CGTCAAAGAA GTATTATCCA AGTCTCAACA TATGCAGAAA
GTTATCCACT TAGCGACTGC TCGCTCGTTC CTCGATACCG TCAAACTAGA CCATGCGGTA
TGGAAAAATA ACGTCTATAG CCATCTGCAA GAGCGAGACT ATCAAGCCCA AGTGAATAAG
CATACCGAAT GCCGTTTAGG TAAGTGGTAT TTCGAGGGCG CGGGAGCCGA GCAGTACAGC
CACCTGGCAA GCTTCAATGG CTTAAATCAG CCTCATCAGC TGGTTCATGA CTCCGGGCAT
CATGCAATTC AAGCGGGTCA GAGTGGTGAT CAACATGCAT TGATTAAACA TGTTGAAGCG
ATGGAGGATG CCAGTGAGGG CGTAGTTCAC TCTATCGATC GCCTGCTCGG CGAAGTCACC
AGTGAGCAAC GCAGGGCTTT ATAA
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| Protein sequence | MLFNNGLKQE NAALKQQLQE LKDKHDQEIK ELVEELKRKD FEHNKLHQEQ QLDATLITSN
LRGGRMLETI RTGLANSAEE LIHENEELKQ LDEMFAQTHT ALSQLEARAQ KISEQTDSTM
NSATALDETA KSIGQLIVAI QDISSQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRTLAG
NAHEASDKIE RLVNRVLGQT HEIKTSISEN QLYAADISAS SEQIDVIVKE VLSKSQHMQK
VIHLATARSF LDTVKLDHAV WKNNVYSHLQ ERDYQAQVNK HTECRLGKWY FEGAGAEQYS
HLASFNGLNQ PHQLVHDSGH HAIQAGQSGD QHALIKHVEA MEDASEGVVH SIDRLLGEVT
SEQRRAL
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