| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1580 |
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| Symbol | |
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| ID | 5410592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1649333 |
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| End bp | 1652236 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868814 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001404740 |
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| Protein GI | 154151122 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0176673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.174359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC AACGACCGGG ACGAAAGGCA TTGTTTGTCG GGGCCCAGGC CCCGGCGGCA
GTACGGACAA CCCCGGATGA AATAGCACAG AAAGTCCGGG ATCTCAATGA AGAGCTTGCA
CTGGCACTCA AAGGTGCCCA TGCAAAAAAG GCAGTACCAC CGCTTGATCC GGCGCATTTC
GGCAGCGAGT ACACAACCCT TGTGGATGCC GTAAACACCG CTGCGGCACA GATGACTGCA
CCCGCACCGG GCGTGCCGGC CCCCGGGGAA ATGCTCCCGG AGATGCTTGC AGAGTACGGG
AAGAAGATCG ATGTGCTCGA ACGCCGGCTC GAATTCATGG AGAAGAACAA CCCGGTGCCC
ATGCTGATTG CAACACCGGC ACTTGATATC ACCGAGGCCA ATGCCGCATA CGTGGCCCTG
ACCGGGATCC CGGAAGACAA GATCGTAAAA ACCAATCTCC ACGATTTTAC CATCACGGAC
CGGTCCGGTG AGGGCGCACG CGAAGCCATA GAAAAGAAAC GGCGGGCCGT GGGCGAACTC
ACCGTTACCT TCCCCTCAGG AGTCCACACC TTGGAACAGT ACTGCATCCC GGTCCTTGAC
AGCAGCGGTG CGGTCACTTC GCTTGTCATT CTCTACGACG ACCTTACCAC AAAGAAAAAG
AAGAACGAGG AGATCGAGCG GCTTAAGGCG CGCTCAGAGA CGATTGTCCA GCAGAACCCG
ATGCCTATCG TGCTCGTTGA TACCGGTTTT ATCATTAAAG TGGTAAACGA TGCCTTCGTG
GCGCTTGCCG GCAGGGAAAA GGACCAGTTG CTCTCCCGGT CCCTCAATGA CCTTGCCATC
ACACAGCAGG CCGGGGACGG GCTTAAAAAA GTCCTTGAGA CCGGGACCCG TTCTGAAGGA
GAGGTTGTCA TTGAGTCTCA GGGGAAGGCA CACCGGCTCC GCCAGTATGG CATCCCCATC
CCCGGGGCAA AGGGCGCCAT CGAGAACATC CTTGTGGTAT ACAACGATAT CACCGGGGAA
AAACAGGAGG CAGGCGAAGG TCTTGATACC CGGAACCTGT CCGAGGCGCT CATCCGGGAA
AATCCTATCC CTATCCTTAT AACCGACCGC TCCTTTACCA TCATCTCGGC TAACACCGCC
TTTGAGAAGC TGAGCGGGTA TACTCCTGAC CGGATCACCG GCATGAACCT GCGCGGGATA
AAGATCCGTG AACAGAAGGG CGAAGGTGCC GGCATTGCAA TCAGGGAGAA ACGCCGCGCA
TCCGGGGAAG TTACCGTGGA TCTCCCGAGC GGGACAAAGA TTCTCGAACA GTACGTGATG
CCGCTCCTGG ACGCCAAAAA CAGTATCGAG CACCTCCTTC TCGTATACTA CGATGTTACT
GCCCAGAGGG CAAGCCAGCA GGACCTTGCA AAGAAGATGG AGGAAGTTGC GGCCTTAAAG
AAGCGCTCCG ATATCATTGT CATGCAGAAC CCCATGCCCA TCATGCTTAT GGATCCCTCC
TTTAAGATCC TCATGGCAAA CGAGGCCTAC ACAAATCTCA CCGGCCTCTC AAAAGAAAAA
ATCCATGGCA TGAGCGCACG GGAGTTTAAG ATACTCTCCC AGTCCGGGGA GGGGCTCAAA
AAAGTGCTTG AAAAGAAGGC CAGGAGCTAT GGCGAGGTTA CCATCGAGTT TCCAAGAGGC
CTGCGCATTC TCGAACAGTA CGGCATCCCC ATGCTGGATG CACAGCAGAA CCTCTCCACG
ATCCTCTGTG TGTATGTGGA TGTGACCGCC CGGCGCGAAC AGGAGAATAA GATCCGGGCC
ATGATGGACG AGGCCAAGGC AAATGCCGAA CTGCTCTCCG CGAGTGCTGC CGAGCTCCAG
ACCGGGCTTG CACGGATCGC TGCCGGAGAT CTCACATACC AGCTCAGCAT CGATGAGGCA
GACCCGCTGG TGCGGCTCAA GAAAGATTAC AACTCGTCCG TTGCTGCAAT ACGGTCGGTC
ATTGCCGAAC TGATGCAGTC AATCCGGAAA CTGGATGTGA CCATCCAGGA CACCATCAAA
AGTACTGACG AGATTGCAAA AGCTACCGAG CAGGTGGCCA TATCCTCCCA GAAGGCAACC
GACAATTCCA AGGAGCAGCT CGCCGGCGTG GAGAAGATCT CCGTCACCGT CTCGGACATC
TCTGCTTCCA TCGAGGAGAT CGCAAGCACT TCCCACGATG TTATGGCTCA TGCCGGAAAA
GCGGCGGAGG AGGGATCCCA TGCCGCAAGC GTGGGCAAGA CTGCAACAGA CAAGATGCAG
GCAGTAGAGA AGATCTCGCA GCAGAGTGTC AATGAGATCA CGGCGTTGAA CGAGCAGATG
CGCCAGATCA CAAAGATCGT CAACCTGATT ACCGATATTG CAAACCAGAC AAACCTGCTT
GCCCTAAACG CTGCGATCGA GGCCGCAAGA GCCGGCGAGC ACGGTCGCGG GTTTGCCGTT
GTTGCCGGGG AAGTAAAGAA CCTTGCCGGG GAGTCCAAGA AGGCAAGCAA CCAGATCGAG
ACCCTCATTA AGGCCATCCA GACAAAAAGC GAAGTTACGG CGACATCCAT CCAGGACTCC
TTTGTGCAGA TTAAGGGCGG CATCGAGAGC GTGAACATGA CGGTCGAATC GCTCAATAAG
ATCATAGCCG AGGCAAGCGT GGTCTCCCAG GGACTTGCCG AGATCACCAA AGCCACCGAG
AGCCAGGCGC AGGCCACTTC CGGCCTGATG GCAGGGATTG ACACGCTCAG GAGATCGACC
GAAAACAACC AGCACCGGAT GGAGGATATG GCGGCCCTTG CACAGGAAAC CAGTGCCTCC
ACAGAAGAGA TCGCCAGTGC TTCTGCCGAA CTCTCGATCA TGGCAGAGCG CTGCTCCGGG
ATGATGAAGG AGTTCCATAC CTGA
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| Protein sequence | MTEQRPGRKA LFVGAQAPAA VRTTPDEIAQ KVRDLNEELA LALKGAHAKK AVPPLDPAHF
GSEYTTLVDA VNTAAAQMTA PAPGVPAPGE MLPEMLAEYG KKIDVLERRL EFMEKNNPVP
MLIATPALDI TEANAAYVAL TGIPEDKIVK TNLHDFTITD RSGEGAREAI EKKRRAVGEL
TVTFPSGVHT LEQYCIPVLD SSGAVTSLVI LYDDLTTKKK KNEEIERLKA RSETIVQQNP
MPIVLVDTGF IIKVVNDAFV ALAGREKDQL LSRSLNDLAI TQQAGDGLKK VLETGTRSEG
EVVIESQGKA HRLRQYGIPI PGAKGAIENI LVVYNDITGE KQEAGEGLDT RNLSEALIRE
NPIPILITDR SFTIISANTA FEKLSGYTPD RITGMNLRGI KIREQKGEGA GIAIREKRRA
SGEVTVDLPS GTKILEQYVM PLLDAKNSIE HLLLVYYDVT AQRASQQDLA KKMEEVAALK
KRSDIIVMQN PMPIMLMDPS FKILMANEAY TNLTGLSKEK IHGMSAREFK ILSQSGEGLK
KVLEKKARSY GEVTIEFPRG LRILEQYGIP MLDAQQNLST ILCVYVDVTA RREQENKIRA
MMDEAKANAE LLSASAAELQ TGLARIAAGD LTYQLSIDEA DPLVRLKKDY NSSVAAIRSV
IAELMQSIRK LDVTIQDTIK STDEIAKATE QVAISSQKAT DNSKEQLAGV EKISVTVSDI
SASIEEIAST SHDVMAHAGK AAEEGSHAAS VGKTATDKMQ AVEKISQQSV NEITALNEQM
RQITKIVNLI TDIANQTNLL ALNAAIEAAR AGEHGRGFAV VAGEVKNLAG ESKKASNQIE
TLIKAIQTKS EVTATSIQDS FVQIKGGIES VNMTVESLNK IIAEASVVSQ GLAEITKATE
SQAQATSGLM AGIDTLRRST ENNQHRMEDM AALAQETSAS TEEIASASAE LSIMAERCSG
MMKEFHT
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