Gene Tcr_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1436 
Symbol 
ID3761695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1552090 
End bp1553082 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content43% 
IMG OID637786167 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_391702 
Protein GI78485777 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAC ATCAACGATT GGTTATGATG GGAACAAGTT TGCTGTCAAC GGCTGCGTTT 
TCTCAGTCAG AAGTGATGGG GGCCCCAATA GCAGGAGTCG CTTTAATTGC AATTCTTGTT
GGAGCGGTTG TTGCGGGAGC CTTGGTTTAC CTAGTTTGGT GTAATAAACC CGGTGTTTGT
GACCAGACCA ATTTAATTGA GGCGGTTGAT AAAATTGCGT CAAGTGATTC AAGCTTCCTC
CCTCTGTCAG ATGAAGGGGT GGATCCTAAG CTGCAAGCAA GTGTCAACCA ATTGTTGTCA
AAAGCGAATG AGATCATTAG TTCAAAACAA GGTGAAATTG AAGCAGCGCA TTCACAAGTG
GCTGTTTTGG AAAGCCAGAT TGAAGAATTA AACGAGACGT TATCGAACGC TTATGCACAA
GCAGAGGTTA CGAGCAGTCA ATCAGATGTT GATGCTTCAG AACTTGTCAG CTTATCGGAA
CATGTCTCAA CTGTCGTTGA TCAAATGAGT ACAGGAACCA ATGCAGGGAT GGCGTCGGCT
TCTAGCGTTA TTTCTGAAGT CAGTGGGTTA ACAGATGAAG TGACGCATGC TTCAACGGTT
ATTAAAGAAC TCGAAGAAGA CAGTAATAAC ATTGGGACAG TGCTGGTCTT GATTCGTGAT
ATCGCAGAGC AAACAAACTT ATTGGCCTTA AATGCGGCCA TTGAAGCCGC ACGTGCAGGT
GAGCATGGTC GAGGGTTTGC GGTTGTGGCC GATGAAGTAA GAATTTTGGC TGGAAAAACG
CAACAAGCGA CAACTGAAAT TCAAAAAATT ATCGAAGAGC TACAGCAAAG AGCCCGTAAT
GCAGTAGAAG TGATGGGAAG TGGTCAAGAG AGAGTGGAAG CGACCCAAAT GCAAGCTGGA
AAAGTAAATG ATTTTTTACA TGAAATCGAA GATAATCTGT CGCAGTTAAA AATAGCTCAA
GAAGCGTTAT CAAAAGCAGT TAATAGCTTT TAA
 
Protein sequence
MRLHQRLVMM GTSLLSTAAF SQSEVMGAPI AGVALIAILV GAVVAGALVY LVWCNKPGVC 
DQTNLIEAVD KIASSDSSFL PLSDEGVDPK LQASVNQLLS KANEIISSKQ GEIEAAHSQV
AVLESQIEEL NETLSNAYAQ AEVTSSQSDV DASELVSLSE HVSTVVDQMS TGTNAGMASA
SSVISEVSGL TDEVTHASTV IKELEEDSNN IGTVLVLIRD IAEQTNLLAL NAAIEAARAG
EHGRGFAVVA DEVRILAGKT QQATTEIQKI IEELQQRARN AVEVMGSGQE RVEATQMQAG
KVNDFLHEIE DNLSQLKIAQ EALSKAVNSF