More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_0830 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009049  Rsph17029_0830  binding-protein-dependent transport systems inner membrane component  100 
 
 
265 aa  519  1e-146  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.225733  normal 
 
 
-
 
NC_007493  RSP_2156  ABC transporter, inner membrane subunit  99.62 
 
 
265 aa  518  1e-146  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6311  binding-protein-dependent transport systems inner membrane component  73.38 
 
 
266 aa  393  1e-108  Sinorhizobium medicae WSM419  Bacteria  normal  0.103333  normal 
 
 
-
 
NC_009668  Oant_3580  binding-protein-dependent transport systems inner membrane component  71.92 
 
 
266 aa  357  9.999999999999999e-98  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.718576  n/a   
 
 
-
 
NC_013922  Nmag_0084  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
272 aa  140  1.9999999999999998e-32  Natrialba magadii ATCC 43099  Archaea  normal  0.0395984  n/a   
 
 
-
 
NC_009668  Oant_4153  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
263 aa  136  3.0000000000000003e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.829399  n/a   
 
 
-
 
NC_008044  TM1040_2990  binding-protein-dependent transport systems inner membrane component  37.32 
 
 
391 aa  136  3.0000000000000003e-31  Ruegeria sp. TM1040  Bacteria  normal  0.0689786  normal  0.478679 
 
 
-
 
NC_009720  Xaut_2579  binding-protein-dependent transport systems inner membrane component  34.13 
 
 
277 aa  135  5e-31  Xanthobacter autotrophicus Py2  Bacteria  normal  0.715101  normal 
 
 
-
 
NC_011982  Avi_8304  ABC transporter  33.47 
 
 
265 aa  135  8e-31  Agrobacterium vitis S4  Bacteria  normal  0.0178234  n/a   
 
 
-
 
NC_010511  M446_4045  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
274 aa  133  3e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.329946  normal 
 
 
-
 
NC_009485  BBta_2420  putative ABC spermidine/putrescine transporter permease protein  32.82 
 
 
281 aa  130  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.814446  normal 
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
275 aa  130  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_010184  BcerKBAB4_1203  ornithine carbamoyltransferase  31.76 
 
 
266 aa  129  4.0000000000000003e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1479  ABC transporter, permease protein  32.52 
 
 
260 aa  129  4.0000000000000003e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0195961  n/a   
 
 
-
 
NC_013923  Nmag_3864  binding-protein-dependent transport systems inner membrane component  32.16 
 
 
279 aa  129  5.0000000000000004e-29  Natrialba magadii ATCC 43099  Archaea  normal  0.623194  n/a   
 
 
-
 
NC_008391  Bamb_4294  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
279 aa  129  5.0000000000000004e-29  Burkholderia ambifaria AMMD  Bacteria  normal  0.144254  normal 
 
 
-
 
NC_007952  Bxe_B2705  spermidine/putrescine ABC transporter inner membrane protein  36.51 
 
 
265 aa  129  7.000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  0.628706  normal 
 
 
-
 
NC_007650  BTH_II0645  polyamine ABC transporter, permease protein  34 
 
 
279 aa  128  1.0000000000000001e-28  Burkholderia thailandensis E264  Bacteria  normal  0.637437  n/a   
 
 
-
 
NC_011772  BCG9842_B4005  spermidine/putrescine ABC transporter, permease protein  31.47 
 
 
266 aa  127  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000178374 
 
 
-
 
NC_011725  BCB4264_A1339  spermidine/putrescine ABC transporter, permease protein  31.47 
 
 
266 aa  127  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3230  binding-protein-dependent transport systems inner membrane component  38.82 
 
 
272 aa  127  1.0000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  33.03 
 
 
282 aa  127  2.0000000000000002e-28  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  33.03 
 
 
282 aa  127  2.0000000000000002e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6628  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
264 aa  127  2.0000000000000002e-28  Burkholderia phymatum STM815  Bacteria  normal  0.381273  normal 
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  33.03 
 
 
282 aa  127  2.0000000000000002e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1400  spermidine/putrescine ABC transporter, permease protein  31.47 
 
 
266 aa  126  3e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1377  spermidine/putrescine ABC transporter, permease protein  31.47 
 
 
266 aa  126  3e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000768374 
 
 
-
 
NC_005945  BAS1201  spermidine/putrescine ABC transporter permease  31.47 
 
 
266 aa  126  3e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.440242  n/a   
 
 
-
 
NC_005957  BT9727_1179  spermidine/putrescine ABC transporter, permease  31.47 
 
 
266 aa  126  3e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1181  spermidine/putrescine ABC transporter, permease  31.47 
 
 
266 aa  126  3e-28  Bacillus cereus E33L  Bacteria  normal  0.0752832  n/a   
 
 
-
 
NC_007530  GBAA_1299  spermidine/putrescine ABC transporter permease  31.47 
 
 
266 aa  126  3e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6540  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
270 aa  126  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.199847 
 
 
-
 
NC_007948  Bpro_4377  binding-protein-dependent transport systems inner membrane component  33.84 
 
 
265 aa  126  4.0000000000000003e-28  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3639  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
268 aa  125  5e-28  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.344703 
 
 
-
 
NC_009674  Bcer98_1009  ornithine carbamoyltransferase  30.04 
 
 
266 aa  125  6e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
272 aa  125  8.000000000000001e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0427  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
274 aa  125  9e-28  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
272 aa  125  1e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_013922  Nmag_1787  binding-protein-dependent transport systems inner membrane component  29.13 
 
 
669 aa  124  1e-27  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0748  polyamine/opine/phosphonate ABC transporter inner membrane protein  35.44 
 
 
264 aa  124  2e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.467059  normal 
 
 
-
 
NC_007435  BURPS1710b_A0812  polyamine ABC transporter, permease protein  33.2 
 
 
279 aa  123  3e-27  Burkholderia pseudomallei 1710b  Bacteria  normal  0.610714  n/a   
 
 
-
 
NC_010681  Bphyt_1894  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
265 aa  123  3e-27  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00977235  normal  0.387076 
 
 
-
 
NC_009075  BURPS668_A2498  putative polyamine ABC transporter, permease protein  33.2 
 
 
289 aa  123  3e-27  Burkholderia pseudomallei 668  Bacteria  normal  0.633965  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2359  putative polyamine ABC transporter, permease protein  33.2 
 
 
289 aa  123  3e-27  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_0103  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
275 aa  122  4e-27  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011989  Avi_2708  ABC transporter membrane spanning protein (polyamine)  31.15 
 
 
264 aa  123  4e-27  Agrobacterium vitis S4  Bacteria  normal  0.319241  n/a   
 
 
-
 
NC_012880  Dd703_1788  binding-protein-dependent transport systems inner membrane component  33.5 
 
 
275 aa  122  5e-27  Dickeya dadantii Ech703  Bacteria  normal  0.0709875  n/a   
 
 
-
 
NC_007413  Ava_5055  binding-protein dependent transport system inner membrane protein  33.5 
 
 
264 aa  122  7e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.429894 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
278 aa  122  8e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6717  ABC spermidine/putrescine transporter, inner membrane subunit  33.33 
 
 
280 aa  122  8e-27  Burkholderia sp. 383  Bacteria  decreased coverage  0.00799546  normal 
 
 
-
 
NC_009485  BBta_1834  ABC transporter, permease protein  31.85 
 
 
269 aa  122  8e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.632575 
 
 
-
 
NC_011369  Rleg2_4105  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
262 aa  121  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2333  binding-protein dependent transport system inner membrane protein  32.54 
 
 
264 aa  121  9.999999999999999e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.161709  normal  0.782854 
 
 
-
 
NC_007802  Jann_3236  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
262 aa  121  9.999999999999999e-27  Jannaschia sp. CCS1  Bacteria  normal  0.0387101  normal  0.554966 
 
 
-
 
NC_007948  Bpro_4417  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
268 aa  121  9.999999999999999e-27  Polaromonas sp. JS666  Bacteria  normal  0.303148  normal 
 
 
-
 
NC_014248  Aazo_3072  binding-protein-dependent transporter inner membrane protein  32.86 
 
 
244 aa  121  9.999999999999999e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  31.53 
 
 
269 aa  120  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_007643  Rru_A2045  binding-protein dependent transport system inner membrane protein  31.45 
 
 
275 aa  120  1.9999999999999998e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.586316  n/a   
 
 
-
 
NC_010622  Bphy_2380  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
279 aa  120  1.9999999999999998e-26  Burkholderia phymatum STM815  Bacteria  normal  0.576146  normal 
 
 
-
 
NC_008463  PA14_07900  putative permease of ABC transporter  33.65 
 
 
276 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00280578 
 
 
-
 
NC_008463  PA14_17620  polyamine transport protein PotC  32.93 
 
 
256 aa  120  1.9999999999999998e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0306  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
264 aa  120  3e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1532  polyamine transport protein PotC  33.33 
 
 
256 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4429  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
264 aa  120  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.186422  normal  0.676109 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  33.65 
 
 
276 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6885  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
279 aa  119  3.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471707  normal  0.190136 
 
 
-
 
NC_010625  Bphy_7052  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
265 aa  119  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.34418 
 
 
-
 
NC_010087  Bmul_6002  binding-protein-dependent transport systems inner membrane component  35.86 
 
 
265 aa  119  4.9999999999999996e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.176391  normal 
 
 
-
 
NC_009668  Oant_4437  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
264 aa  119  4.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  33.02 
 
 
274 aa  119  6e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_010086  Bmul_4662  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
278 aa  119  6e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.445054  normal 
 
 
-
 
NC_010087  Bmul_5431  binding-protein-dependent transport systems inner membrane component  33.05 
 
 
278 aa  119  6e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.708074  normal  0.0941502 
 
 
-
 
NC_009050  Rsph17029_3039  binding-protein-dependent transport systems inner membrane component  30.89 
 
 
264 aa  119  7e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.645477  normal 
 
 
-
 
NC_007494  RSP_3393  ABC opine/polyamine transporter, inner membrane subunit  30.89 
 
 
264 aa  119  7e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.381224  n/a   
 
 
-
 
NC_007908  Rfer_0887  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
263 aa  119  7e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2930  spermidine/putrescine ABC transporter inner membrane protein  32.23 
 
 
279 aa  119  7e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7195  ABC transporter permease  29.25 
 
 
271 aa  118  7.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0469  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
261 aa  118  9e-26  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3606  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
281 aa  118  9.999999999999999e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2838  ornithine carbamoyltransferase  31.25 
 
 
286 aa  118  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  hitchhiker  0.000365648  normal 
 
 
-
 
NC_008061  Bcen_4445  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
281 aa  118  9.999999999999999e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_011831  Cagg_2347  Ornithine carbamoyltransferase  33.6 
 
 
288 aa  118  9.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00485927 
 
 
-
 
NC_008391  Bamb_3299  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
278 aa  118  9.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.735344  normal  0.669781 
 
 
-
 
NC_008543  Bcen2424_3921  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
281 aa  118  9.999999999999999e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1567  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
261 aa  117  1.9999999999999998e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  0.260601  normal 
 
 
-
 
NC_004578  PSPTO_2522  ABC transporter, permease protein  32.54 
 
 
264 aa  117  1.9999999999999998e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4995  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
265 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.887799  normal 
 
 
-
 
NC_007948  Bpro_3945  binding-protein-dependent transport systems inner membrane component  32.93 
 
 
264 aa  117  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  0.334886  normal  0.870267 
 
 
-
 
NC_010322  PputGB1_3207  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
264 aa  117  1.9999999999999998e-25  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  33.02 
 
 
275 aa  117  1.9999999999999998e-25  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_010552  BamMC406_3815  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
281 aa  116  3e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.723291  normal 
 
 
-
 
NC_011658  BCAH187_A1441  spermidine/putrescine ABC transporter, permease protein  31.47 
 
 
266 aa  116  3e-25  Bacillus cereus AH187  Bacteria  normal  0.0782345  n/a   
 
 
-
 
NC_007511  Bcep18194_B2167  ABC spermidine/putrescine transporter, inner membrane subunit  32.48 
 
 
278 aa  117  3e-25  Burkholderia sp. 383  Bacteria  hitchhiker  0.00407242  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
264 aa  116  3e-25  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  31.62 
 
 
275 aa  117  3e-25  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_011004  Rpal_5130  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
596 aa  116  3.9999999999999997e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3949  ornithine carbamoyltransferase  31.53 
 
 
287 aa  116  3.9999999999999997e-25  Caulobacter sp. K31  Bacteria  normal  0.551991  normal 
 
 
-
 
NC_010681  Bphyt_2374  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
270 aa  116  3.9999999999999997e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  32.14 
 
 
269 aa  116  5e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_010623  Bphy_4324  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
279 aa  115  5e-25  Burkholderia phymatum STM815  Bacteria  normal  normal  0.644272 
 
 
-
 
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