| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2347 |
|---|
| Symbol | |
|---|
| ID | 7268697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2855647 |
|---|
| End bp | 2856513 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643567176 |
|---|
| Product | Ornithine carbamoyltransferase |
|---|
| Protein accession | YP_002463661 |
|---|
| Protein GI | 219849228 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00485927 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA CAGCGCCTGC TACGACAACG GCAACGCGGA GCCGCAAGGT CTTTGTTGCC
GGGCAGTTGA CGTGGAGCGG GTTGGGATTA GCTCTCTTTT CGGTACTCGT GTACCTGTTT
CTCTACGCAC CGATCGCCAT TCTCGTGCTC TTCTCGTTTA CGCGCGACGA GTTTGGGGTG
CGTTGGACCG GGTTTACTCT CGATTGGTAC ATCCGCCTCT TCAATAACCC CCGTATGATG
GGGGCGGCCT GGAATACGCT CGTGGTGGCG AGTGTCTCTA CCCTTGTGTC AACGGTTATC
GGCACGCTTC TGGCGATAGC GATGGAGCGC TATCGCTTTC GCGGGCGTAA TGCGATGGAA
GGACTGATCT ATCTCCCAAT CGTTGTGCCT GAAATCGTAA TGGCGGTAGC TCTGCTCGCC
TTTTCGGCAA TTGTGTTCGA TGCGATCAAA TGGCTGACCG GTGAGACACT ACGCCGTAAT
CTTACCACCG TTACTATCGG TCATATTGCG TTCAGCATCT CGTTCGTGGT CGTCGTTGTT
CGCACCAGTC TGAAAAACTT CGACCGCCGT CTTGAAGAAG CCGCTGCCGA TCTCGGTGCA
AATAGCTGGA ATATCTTCTG GCGGATCACC TTTCCACTGA TCTTACCCGG TATTGTCGGT
GGGGCATTGC TCGCGTTTAC CCTTTCGCTC GATGATTTCA TCATTTCACT GTTTTTGTCC
GGTCCCGGCA CCTCTTTACT ACCGGTCGAA GTATACAATC GTGTGCGCCG AGCAGTAACC
CCTGAAATAA ACGCCATTTC AACGCTAATG CTTCTCTTGT CGATGACACT GGTTGCGCTC
TCGCAACTAT TACAGCGACG GCGCTGA
|
|---|
| Protein sequence | MIKTAPATTT ATRSRKVFVA GQLTWSGLGL ALFSVLVYLF LYAPIAILVL FSFTRDEFGV
RWTGFTLDWY IRLFNNPRMM GAAWNTLVVA SVSTLVSTVI GTLLAIAMER YRFRGRNAME
GLIYLPIVVP EIVMAVALLA FSAIVFDAIK WLTGETLRRN LTTVTIGHIA FSISFVVVVV
RTSLKNFDRR LEEAAADLGA NSWNIFWRIT FPLILPGIVG GALLAFTLSL DDFIISLFLS
GPGTSLLPVE VYNRVRRAVT PEINAISTLM LLLSMTLVAL SQLLQRRR
|
|---|
| |