| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5055 |
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| Symbol | |
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| ID | 3683537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6348406 |
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| End bp | 6349200 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637720416 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_325547 |
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| Protein GI | 75911251 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.429894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCAA AAAAGAGTTT CAAGTTTTCC TCATGGCAGG CGGTTTTCTC CGTACTCCTA
TTTATATTCA TGTACCTACC TATCCTGGTA CTGGGATTTT ATAGCTTCAA TAAATCACCT
TACAGTGCAA CTTGGCAAGG CTTCACCCTT GATTGGTATT ACCAGCTATT AGGTGACGAT
CGCATCTTAT CAGCTTTGAA AAATAGTTTG CTGGTTGCCT GTAGTGCCGT CGGTATTTCT
GCCGTATTAG GAACTTTAAT GGCTGTGGGT TTGGCGCGTT ATCAGTTTCC TGGAAAGAAT
TTGTATCGTG GCATTGCTTA TCTACCATTA ATTATTCCCG ATATTGCGAT CGCTGTTGCC
ACTCTCGTCT TTCTCGCTAC CTTCGCCATC CCCCTCAGCT TATGGACGAT TGTGGCTGCC
CATGTGGTAT TTTGTATAGC TTATATCGCT TTAGTGGTTT CATCACGACT GACAAATTTA
GACCCCCATT TAGAAGAAGC TGCACTTGAT TTAGGCGCTA CACCAATACA AGCATTTCTG
CAAGTATTAC TACCACAATT AATGCCAGGA ATTGTTGCTG GCTGTTTACT AGCATTTGTT
CTTAGTCTAG ATGACTTTCT CATTGCTAGT TTTACCTCAG GTAGCGGTTA CAACACCTTA
CCAATGGAAA TTTTTAGTCG GATTAGAAGT GGTGTTAAAC CTGATATTAA TGCTCTCAGT
GTTTTGCTGA TTTTTCTATC TGCAATTGTT GCCTTTATAG CAGAATCAAT TCGCTCCTTA
GGAGAACGAA AATAA
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| Protein sequence | MLSKKSFKFS SWQAVFSVLL FIFMYLPILV LGFYSFNKSP YSATWQGFTL DWYYQLLGDD
RILSALKNSL LVACSAVGIS AVLGTLMAVG LARYQFPGKN LYRGIAYLPL IIPDIAIAVA
TLVFLATFAI PLSLWTIVAA HVVFCIAYIA LVVSSRLTNL DPHLEEAALD LGATPIQAFL
QVLLPQLMPG IVAGCLLAFV LSLDDFLIAS FTSGSGYNTL PMEIFSRIRS GVKPDINALS
VLLIFLSAIV AFIAESIRSL GERK
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