More than 300 homologs were found in PanDaTox collection
for query gene RPC_1083 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_1083  putative two-component response-regulatory protein YehT  100 
 
 		 239 aa  479  1e-134  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.450563  normal  1 
 
 
-
 
NC_007643  Rru_A0376  putative two-component response-regulatory protein YehT  66.81 
 
 		 238 aa  305  3e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_2723  putative two-component response-regulatory protein YehT  60.67 
 
 		 239 aa  294  7e-79  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010498  EcSMS35_0919  putative two-component response-regulatory protein YehT  59 
 
 		 239 aa  290  2e-77  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
CP001509  ECD_02054  predicted response regulator in two-component system withYehU  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_1533  two component transcriptional regulator, LytTR family  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli DH1  Bacteria  normal  0.726215  n/a   
 
 
-
 
NC_012892  B21_02012  hypothetical protein  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E0865  putative two-component response-regulatory protein YehT  58.58 
 
 		 239 aa  288  5.0000000000000004e-77  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_2413  putative two-component response-regulatory protein YehT  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_3112  putative two-component response-regulatory protein YehT  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.148941 
 
 
-
 
NC_009800  EcHS_A2259  putative two-component response-regulatory protein YehT  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_1522  putative two-component response-regulatory protein YehT  59 
 
 		 239 aa  288  5.0000000000000004e-77  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2093  putative two-component response-regulatory protein YehT  57.14 
 
 		 237 aa  284  9e-76  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B2304  putative two-component response-regulatory protein YehT  57.74 
 
 		 239 aa  283  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2393  putative two-component response-regulatory protein YehT  57.74 
 
 		 239 aa  283  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A2505  putative two-component response-regulatory protein YehT  57.74 
 
 		 239 aa  283  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A2397  putative two-component response-regulatory protein YehT  57.74 
 
 		 239 aa  283  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.423362  normal  1 
 
 
-
 
NC_011080  SNSL254_A2348  putative two-component response-regulatory protein YehT  57.74 
 
 		 239 aa  283  1.0000000000000001e-75  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_0959  putative two-component response-regulatory protein YehT  56.07 
 
 		 241 aa  279  2e-74  Dickeya zeae Ech1591  Bacteria  normal  0.606019  n/a   
 
 
-
 
NC_012880  Dd703_0957  putative two-component response-regulatory protein YehT  56.07 
 
 		 241 aa  278  4e-74  Dickeya dadantii Ech703  Bacteria  normal  0.147856  n/a   
 
 
-
 
NC_009832  Spro_4587  putative two-component response-regulatory protein YehT  60.67 
 
 		 241 aa  271  7e-72  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_3221  putative two-component response-regulatory protein YehT  55.83 
 
 		 238 aa  266  2e-70  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3485  putative two-component response-regulatory protein YehT  55.83 
 
 		 238 aa  265  4e-70  Yersinia pestis Angola  Bacteria  normal  1  normal  0.159726 
 
 
-
 
NC_010465  YPK_3358  putative two-component response-regulatory protein YehT  55.83 
 
 		 238 aa  265  4e-70  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_3149  putative two-component response-regulatory protein YehT  55.23 
 
 		 238 aa  263  2e-69  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1130  putative two-component response-regulatory protein YehT  55.04 
 
 		 238 aa  260  1e-68  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0224  putative two-component response-regulatory protein YehT  54.01 
 
 		 237 aa  252  4.0000000000000004e-66  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00984  putative two-component response-regulatory protein YehT  50.83 
 
 		 242 aa  246  2e-64  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_2452  putative two-component response-regulatory protein YehT  52.92 
 
 		 238 aa  244  9.999999999999999e-64  Rhodoferax ferrireducens T118  Bacteria  normal  0.0310324  n/a   
 
 
-
 
NC_009654  Mmwyl1_3341  putative two-component response-regulatory protein YehT  49.18 
 
 		 244 aa  243  1.9999999999999999e-63  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.798853 
 
 
-
 
NC_013456  VEA_004414  response regulator of the LytR/AlgR family  50.41 
 
 		 242 aa  243  1.9999999999999999e-63  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1440  putative two-component response-regulatory protein YehT  50.84 
 
 		 236 aa  228  6e-59  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1479  putative two-component response-regulatory protein YehT  46.84 
 
 		 236 aa  228  7e-59  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0100477  n/a   
 
 
-
 
NC_011312  VSAL_I1318  putative two-component response-regulatory protein YehT  46.22 
 
 		 238 aa  226  2e-58  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_2883  putative two-component response-regulatory protein YehT  45.99 
 
 		 236 aa  226  3e-58  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000903631  unclonable  0.0000000000401288 
 
 
-
 
NC_008322  Shewmr7_2502  putative two-component response-regulatory protein YehT  48.1 
 
 		 236 aa  224  7e-58  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00178929  normal  0.0452702 
 
 
-
 
NC_004347  SO_2823  putative two-component response-regulatory protein YehT  48.1 
 
 		 236 aa  224  8e-58  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2432  putative two-component response-regulatory protein YehT  47.68 
 
 		 236 aa  224  1e-57  Shewanella sp. MR-4  Bacteria  decreased coverage  0.0000158974  hitchhiker  0.00361478 
 
 
-
 
NC_008577  Shewana3_2594  putative two-component response-regulatory protein YehT  47.68 
 
 		 236 aa  223  1e-57  Shewanella sp. ANA-3  Bacteria  normal  0.0103906  hitchhiker  0.00157605 
 
 
-
 
NC_009438  Sputcn32_1548  putative two-component response-regulatory protein YehT  46.41 
 
 		 236 aa  224  1e-57  Shewanella putrefaciens CN-32  Bacteria  normal  0.496368  n/a   
 
 
-
 
NC_009665  Shew185_1658  putative two-component response-regulatory protein YehT  47.26 
 
 		 236 aa  223  2e-57  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000153786  n/a   
 
 
-
 
NC_009997  Sbal195_1695  putative two-component response-regulatory protein YehT  47.26 
 
 		 236 aa  223  2e-57  Shewanella baltica OS195  Bacteria  decreased coverage  0.00000884824  normal  1 
 
 
-
 
NC_009052  Sbal_1673  putative two-component response-regulatory protein YehT  47.26 
 
 		 236 aa  223  2e-57  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000537167  n/a   
 
 
-
 
NC_011663  Sbal223_2685  putative two-component response-regulatory protein YehT  47.26 
 
 		 236 aa  223  2e-57  Shewanella baltica OS223  Bacteria  normal  0.0538398  hitchhiker  0.000367908 
 
 
-
 
NC_009675  Anae109_3416  putative two-component response-regulatory protein YehT  49.37 
 
 		 237 aa  221  8e-57  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.329348  normal  0.0577965 
 
 
-
 
NC_008700  Sama_1281  putative two-component response-regulatory protein YehT  48.32 
 
 		 236 aa  221  9.999999999999999e-57  Shewanella amazonensis SB2B  Bacteria  normal  0.155887  normal  0.0159688 
 
 
-
 
NC_010506  Swoo_1765  putative two-component response-regulatory protein YehT  46.58 
 
 		 232 aa  216  4e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  0.199181  hitchhiker  0.00544661 
 
 
-
 
NC_008345  Sfri_2434  putative two-component response-regulatory protein YehT  42.86 
 
 		 236 aa  215  5e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.318628  n/a   
 
 
-
 
NC_009092  Shew_2329  putative two-component response-regulatory protein YehT  45.61 
 
 		 236 aa  211  7.999999999999999e-54  Shewanella loihica PV-4  Bacteria  normal  0.0108361  normal  0.9097 
 
 
-
 
NC_011145  AnaeK_3062  putative two-component response-regulatory protein YehT  46.47 
 
 		 239 aa  194  1e-48  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3170  putative two-component response-regulatory protein YehT  46.47 
 
 		 239 aa  192  3e-48  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_2172  LytR/AlgR family transcriptional regulator  39.44 
 
 		 252 aa  152  4e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0721488  normal  0.0255714 
 
 
-
 
NC_011830  Dhaf_4408  two component transcriptional regulator, LytTR family  37.69 
 
 		 268 aa  151  8e-36  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3773  two component transcriptional regulator, LytTR family  37.07 
 
 		 260 aa  147  2.0000000000000003e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.10961  normal  1 
 
 
-
 
NC_011899  Hore_10420  two component transcriptional regulator, LytTR family  37.3 
 
 		 253 aa  144  1e-33  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000460621  n/a   
 
 
-
 
NC_013170  Ccur_01160  response regulator of the LytR/AlgR family  37.7 
 
 		 238 aa  143  3e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_00400  response regulator of the LytR/AlgR family  36.89 
 
 		 237 aa  142  4e-33  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.132657  normal  1 
 
 
-
 
NC_013204  Elen_0137  two component transcriptional regulator, LytTR family  36.21 
 
 		 237 aa  140  1.9999999999999998e-32  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_5734  two component transcriptional regulator, LytTR family  36.8 
 
 		 257 aa  136  3.0000000000000003e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2697  LytR/AlgR family transcriptional regulator  38.27 
 
 		 240 aa  133  3e-30  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_5142  two component transcriptional regulator, LytTR family  36.29 
 
 		 244 aa  131  6.999999999999999e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.546377  normal  1 
 
 
-
 
NC_010424  Daud_0119  response regulator receiver protein  35.77 
 
 		 249 aa  130  1.0000000000000001e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_1323  two component transcriptional regulator, LytTR family  34.29 
 
 		 237 aa  130  1.0000000000000001e-29  Atopobium parvulum DSM 20469  Bacteria  normal  0.0540721  normal  0.0273831 
 
 
-
 
NC_013385  Adeg_1761  two component transcriptional regulator, LytTR family  34.8 
 
 		 251 aa  129  4.0000000000000003e-29  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_0374  two component transcriptional regulator, LytTR family  35.22 
 
 		 242 aa  129  6e-29  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_3733  response regulator receiver domain-containing protein  34.92 
 
 		 249 aa  128  6e-29  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.766169 
 
 
-
 
NC_013061  Phep_1542  LytTr DNA-binding region  32.93 
 
 		 245 aa  127  2.0000000000000002e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.300206 
 
 
-
 
NC_008009  Acid345_0420  LytR/AlgR family transcriptional regulator  32.94 
 
 		 317 aa  127  2.0000000000000002e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0328897  normal  0.0302219 
 
 
-
 
NC_010184  BcerKBAB4_5234  LytTR family two component transcriptional regulator  32.79 
 
 		 246 aa  127  2.0000000000000002e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2957  response regulator receiver protein  35.25 
 
 		 236 aa  126  3e-28  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00954821  n/a   
 
 
-
 
NC_007644  Moth_1964  LytR/AlgR family transcriptional regulator  35.46 
 
 		 255 aa  124  2e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.777054 
 
 
-
 
NC_010571  Oter_0067  LytTR family two component transcriptional regulator  35.34 
 
 		 268 aa  122  4e-27  Opitutus terrae PB90-1  Bacteria  normal  0.169577  normal  0.169612 
 
 
-
 
NC_013385  Adeg_0898  two component transcriptional regulator, LytTR family  36.65 
 
 		 265 aa  122  4e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2397  two component transcriptional regulator, LytTR family  36.43 
 
 		 261 aa  122  4e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2671  response regulator receiver protein  37.75 
 
 		 243 aa  122  7e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  hitchhiker  0.000000000586434 
 
 
-
 
NC_013730  Slin_3594  two component transcriptional regulator, LytTR family  34.98 
 
 		 260 aa  122  7e-27  Spirosoma linguale DSM 74  Bacteria  normal  0.833136  normal  0.0457058 
 
 
-
 
NC_013132  Cpin_6586  two component transcriptional regulator, LytTR family  30.92 
 
 		 246 aa  121  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.318104  normal  1 
 
 
-
 
NC_003910  CPS_1819  LytTr DNA-binding response regulator  32.49 
 
 		 260 aa  121  9.999999999999999e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.148301  n/a   
 
 
-
 
NC_013131  Caci_0068  two component transcriptional regulator, LytTR family  34.44 
 
 		 244 aa  121  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00288448  normal  1 
 
 
-
 
NC_009953  Sare_5008  LytTR family two component transcriptional regulator  37.6 
 
 		 250 aa  120  1.9999999999999998e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.135227  hitchhiker  0.0000288771 
 
 
-
 
NC_009632  SaurJH1_0252  two-component response regulator  30.49 
 
 		 246 aa  120  1.9999999999999998e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_3159  response regulator receiver  31.22 
 
 		 242 aa  120  1.9999999999999998e-26  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_2329  LytTR family two component transcriptional regulator  35.12 
 
 		 255 aa  120  1.9999999999999998e-26  Opitutus terrae PB90-1  Bacteria  normal  0.0531557  decreased coverage  0.00207881 
 
 
-
 
NC_008751  Dvul_2356  response regulator receiver protein  37.02 
 
 		 257 aa  120  1.9999999999999998e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.325932  normal  0.149931 
 
 
-
 
NC_009487  SaurJH9_0246  two-component response regulator  30.49 
 
 		 246 aa  120  1.9999999999999998e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_4494  LytTr DNA-binding region  37.19 
 
 		 250 aa  120  1.9999999999999998e-26  Salinispora tropica CNB-440  Bacteria  normal  0.0706486  normal  0.304613 
 
 
-
 
NC_003909  BCE_5573  response regulator LytR  31.58 
 
 		 246 aa  119  3e-26  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5295  response regulator LytR  31.58 
 
 		 246 aa  119  3e-26  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5122  response regulator  31.58 
 
 		 246 aa  119  3e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_5691  response regulator LytR  31.58 
 
 		 246 aa  119  3e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5621  response regulator LytR  31.58 
 
 		 246 aa  119  3e-26  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04138  two-component system regulatory protein  34.58 
 
 		 245 aa  119  3e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_011773  BCAH820_5536  response regulator LytR  31.58 
 
 		 246 aa  119  3e-26  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK5137  response regulator  31.58 
 
 		 246 aa  119  3.9999999999999996e-26  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1279  two component transcriptional regulator, LytTR family  33.33 
 
 		 248 aa  119  3.9999999999999996e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.111911  normal  0.254446 
 
 
-
 
NC_013037  Dfer_1004  two component transcriptional regulator, LytTR family  32.79 
 
 		 257 aa  118  7e-26  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00878343  normal  0.279198 
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  30.71 
 
 		 270 aa  118  7.999999999999999e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1527  LytTR family two component transcriptional regulator  34.4 
 
 		 246 aa  117  9.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  0.109257  normal  1 
 
 
-
 
NC_008009  Acid345_1001  LytR/AlgR family transcriptional regulator  32.95 
 
 		 262 aa  117  9.999999999999999e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0103069 
 
 
-
 
NC_010424  Daud_0469  response regulator receiver protein  33.73 
 
 		 254 aa  118  9.999999999999999e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
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