More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_1833 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_2111  aerotaxis receptor Aer-2  86.18 
 
 
521 aa  933    Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  77.54 
 
 
521 aa  835    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  84.45 
 
 
521 aa  905    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  86.18 
 
 
521 aa  935    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  85.99 
 
 
521 aa  929    Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  77.35 
 
 
521 aa  833    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3406  PAS  84.26 
 
 
521 aa  905    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  78.89 
 
 
521 aa  846    Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  86.76 
 
 
521 aa  939    Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  100 
 
 
521 aa  1063    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  52.11 
 
 
521 aa  519  1e-146  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_007005  Psyr_3735  PAS  51.53 
 
 
521 aa  496  1e-139  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  50.85 
 
 
521 aa  494  9.999999999999999e-139  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  49.43 
 
 
534 aa  475  1e-133  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  49.25 
 
 
521 aa  473  1e-132  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.87 
 
 
521 aa  471  1.0000000000000001e-131  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.06 
 
 
521 aa  468  9.999999999999999e-131  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
522 aa  450  1e-125  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.71 
 
 
523 aa  442  1e-123  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
521 aa  438  1e-121  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  47.62 
 
 
521 aa  434  1e-120  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.62 
 
 
521 aa  434  1e-120  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
524 aa  426  1e-118  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
515 aa  419  1e-116  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  43.13 
 
 
527 aa  408  1.0000000000000001e-112  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42 
 
 
527 aa  406  1.0000000000000001e-112  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.8 
 
 
521 aa  384  1e-105  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  43.26 
 
 
529 aa  378  1e-103  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.19 
 
 
526 aa  376  1e-103  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.34 
 
 
524 aa  366  1e-100  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.54 
 
 
524 aa  366  1e-100  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.54 
 
 
524 aa  366  1e-100  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
524 aa  365  1e-99  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.27 
 
 
524 aa  364  2e-99  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
524 aa  364  2e-99  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  40.08 
 
 
524 aa  363  3e-99  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.51 
 
 
524 aa  362  9e-99  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  39.21 
 
 
524 aa  360  3e-98  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
520 aa  355  8.999999999999999e-97  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  39.5 
 
 
524 aa  355  1e-96  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
419 aa  352  1e-95  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  37.76 
 
 
518 aa  345  8.999999999999999e-94  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  37.21 
 
 
524 aa  342  8e-93  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  39.18 
 
 
532 aa  337  3.9999999999999995e-91  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
531 aa  333  5e-90  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  37.71 
 
 
511 aa  327  5e-88  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.07 
 
 
516 aa  318  2e-85  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
538 aa  315  9.999999999999999e-85  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  39.01 
 
 
522 aa  315  9.999999999999999e-85  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  38.81 
 
 
522 aa  314  1.9999999999999998e-84  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.81 
 
 
522 aa  312  7.999999999999999e-84  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
532 aa  311  2e-83  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  34.62 
 
 
516 aa  311  2e-83  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
522 aa  309  8e-83  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.73 
 
 
514 aa  306  6e-82  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  38.57 
 
 
522 aa  304  3.0000000000000004e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.81 
 
 
522 aa  303  4.0000000000000003e-81  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.33 
 
 
514 aa  301  2e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.42 
 
 
522 aa  300  5e-80  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  35.01 
 
 
532 aa  299  7e-80  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.79 
 
 
524 aa  299  8e-80  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.22 
 
 
522 aa  299  9e-80  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
511 aa  297  3e-79  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  36.66 
 
 
523 aa  295  1e-78  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
522 aa  293  5e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  35.07 
 
 
513 aa  289  7e-77  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.99 
 
 
522 aa  288  2e-76  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.99 
 
 
522 aa  288  2e-76  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  35.44 
 
 
517 aa  287  2.9999999999999996e-76  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  34.79 
 
 
520 aa  285  1.0000000000000001e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.02 
 
 
518 aa  285  1.0000000000000001e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.58 
 
 
522 aa  284  2.0000000000000002e-75  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
522 aa  283  6.000000000000001e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0674  PAS  35.6 
 
 
544 aa  283  6.000000000000001e-75  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
522 aa  282  1e-74  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.67 
 
 
522 aa  281  1e-74  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
533 aa  280  4e-74  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.78 
 
 
519 aa  278  2e-73  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.76 
 
 
517 aa  277  3e-73  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  35.24 
 
 
514 aa  274  2.0000000000000002e-72  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  33.7 
 
 
557 aa  271  2e-71  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.09 
 
 
598 aa  267  2.9999999999999995e-70  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.38 
 
 
514 aa  266  5e-70  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.29 
 
 
575 aa  266  5.999999999999999e-70  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007298  Daro_1363  PAS  34.22 
 
 
544 aa  266  1e-69  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.79 
 
 
535 aa  265  1e-69  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  34 
 
 
514 aa  265  2e-69  Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.61 
 
 
514 aa  263  4e-69  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.19 
 
 
514 aa  263  4.999999999999999e-69  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.07 
 
 
556 aa  263  6e-69  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  32.84 
 
 
565 aa  263  8e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  34.65 
 
 
514 aa  262  1e-68  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  34.14 
 
 
580 aa  262  1e-68  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  34.14 
 
 
580 aa  262  1e-68  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  34.14 
 
 
580 aa  262  1e-68  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  34.14 
 
 
580 aa  262  1e-68  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.88 
 
 
514 aa  261  2e-68  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06258  hypothetical protein  35.07 
 
 
520 aa  261  3e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.46 
 
 
519 aa  261  3e-68  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  34.13 
 
 
623 aa  259  8e-68  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
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