More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A3686 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008825  Mpe_A3686  response regulator  100 
 
 
261 aa  515  1.0000000000000001e-145  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0923  response regulator receiver protein  36.8 
 
 
279 aa  127  1.0000000000000001e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010465  YPK_2844  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  38.06 
 
 
957 aa  85.5  7e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.436473  n/a   
 
 
-
 
NC_010159  YpAngola_A1308  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  38.06 
 
 
949 aa  85.5  8e-16  Yersinia pestis Angola  Bacteria  decreased coverage  0.00392012  normal 
 
 
-
 
NC_009708  YpsIP31758_2765  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  38.06 
 
 
949 aa  85.5  8e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.266073  n/a   
 
 
-
 
NC_009832  Spro_3268  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  42.4 
 
 
957 aa  84.3  0.000000000000002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00176531  normal 
 
 
-
 
NC_009436  Ent638_2798  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  38.81 
 
 
949 aa  82.8  0.000000000000005  Enterobacter sp. 638  Bacteria  decreased coverage  0.000245809  normal 
 
 
-
 
NC_011884  Cyan7425_2673  response regulator receiver modulated serine phosphatase  39.82 
 
 
392 aa  82.4  0.000000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5034  type IV pilus response regulator PilG  36.21 
 
 
136 aa  82.4  0.000000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0488  response regulator receiver  36.21 
 
 
136 aa  82.4  0.000000000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3358  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82.4  0.000000000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  hitchhiker  0.00504503  normal 
 
 
-
 
NC_009801  EcE24377A_2519  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82  0.000000000000008  Escherichia coli E24377A  Bacteria  hitchhiker  0.000000827535  n/a   
 
 
-
 
NC_010468  EcolC_1432  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82  0.000000000000009  Escherichia coli ATCC 8739  Bacteria  normal  0.0516926  hitchhiker  0.00218938 
 
 
-
 
NC_010498  EcSMS35_2367  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82  0.000000000000009  Escherichia coli SMS-3-5  Bacteria  decreased coverage  0.000101959  normal 
 
 
-
 
NC_010658  SbBS512_E0720  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82  0.000000000000009  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.00107574  n/a   
 
 
-
 
NC_009800  EcHS_A2359  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
949 aa  82  0.000000000000009  Escherichia coli HS  Bacteria  decreased coverage  0.000000333746  n/a   
 
 
-
 
CP001509  ECD_02145  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  36.31 
 
 
933 aa  81.6  0.00000000000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1440  histidine kinase  36.31 
 
 
949 aa  81.6  0.00000000000001  Escherichia coli DH1  Bacteria  hitchhiker  0.00541515  n/a   
 
 
-
 
NC_012892  B21_02104  hypothetical protein  36.31 
 
 
933 aa  81.6  0.00000000000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3018  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  32.16 
 
 
955 aa  80.9  0.00000000000002  Dickeya zeae Ech1591  Bacteria  normal  0.0433784  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  39.84 
 
 
446 aa  80.9  0.00000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1106  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  41.6 
 
 
951 aa  80.9  0.00000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.615004  n/a   
 
 
-
 
NC_009675  Anae109_3814  response regulator receiver protein  35.48 
 
 
735 aa  80.1  0.00000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.706947  hitchhiker  0.0056347 
 
 
-
 
NC_012560  Avin_03180  type IV pili response regulator, PilG  35.54 
 
 
135 aa  79.7  0.00000000000005  Azotobacter vinelandii DJ  Bacteria  normal  0.392248  n/a   
 
 
-
 
NC_012918  GM21_2192  CheA signal transduction histidine kinase  39.07 
 
 
801 aa  79  0.00000000000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007498  Pcar_1056  two component hybrid sensor histidine kinase  31.68 
 
 
1014 aa  78.6  0.00000000000009  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3746  response regulator receiver protein  38.74 
 
 
714 aa  78.2  0.0000000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_008609  Ppro_0507  two component transcriptional regulator  37.04 
 
 
236 aa  78.2  0.0000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3688  response regulator receiver domain-containing protein  38.74 
 
 
718 aa  78.2  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2691  putative PAS/PAC sensor protein  37.07 
 
 
385 aa  78.2  0.0000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.10412 
 
 
-
 
NC_012918  GM21_2359  CheA signal transduction histidine kinase  43.14 
 
 
756 aa  77.8  0.0000000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_0403  response regulator receiver protein  35.34 
 
 
135 aa  77.4  0.0000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1671  response regulator/GGDEF domain-containing protein  36.8 
 
 
322 aa  77.8  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5761  multi-sensor hybrid histidine kinase  35.54 
 
 
1204 aa  77.4  0.0000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.122146 
 
 
-
 
NC_007298  Daro_3686  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal  36.36 
 
 
620 aa  77.4  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.926172  normal 
 
 
-
 
NC_013421  Pecwa_3210  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  40.8 
 
 
951 aa  77.8  0.0000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0508  twitching motility protein PilG  34.48 
 
 
135 aa  77.4  0.0000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2187  two component, sigma54 specific, Fis family transcriptional regulator  40.19 
 
 
456 aa  77.4  0.0000000000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3767  response regulator receiver protein  33.06 
 
 
130 aa  77.4  0.0000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  0.401563  n/a   
 
 
-
 
NC_011891  A2cp1_3829  response regulator receiver protein  38.74 
 
 
713 aa  77.4  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0106552  n/a   
 
 
-
 
NC_007974  Rmet_4966  two-component sensor response receiver component, histidine kinase  36.3 
 
 
951 aa  77.8  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.292915 
 
 
-
 
NC_007492  Pfl01_5308  response regulator receiver domain-containing protein  36.61 
 
 
134 aa  76.6  0.0000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0630269  normal  0.22086 
 
 
-
 
NC_012880  Dd703_1040  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  33.33 
 
 
934 aa  77  0.0000000000003  Dickeya dadantii Ech703  Bacteria  normal  0.301921  n/a   
 
 
-
 
NC_007958  RPD_3038  response regulator PleD  42.24 
 
 
457 aa  76.6  0.0000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.372566  normal  0.319547 
 
 
-
 
NC_008463  PA14_05320  twitching motility protein PilG  34.48 
 
 
135 aa  77  0.0000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4113  multi-sensor hybrid histidine kinase  33.9 
 
 
801 aa  76.3  0.0000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0059237 
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  42.62 
 
 
456 aa  76.6  0.0000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1943  histidine kinase  36.59 
 
 
647 aa  76.6  0.0000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.539019  n/a   
 
 
-
 
NC_007778  RPB_2413  response regulator PleD  41.38 
 
 
457 aa  76.6  0.0000000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.592932  normal  0.173821 
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  40.54 
 
 
449 aa  76.6  0.0000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2456  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  40.8 
 
 
948 aa  76.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.290959  normal  0.1829 
 
 
-
 
NC_011205  SeD_A2615  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  39.53 
 
 
915 aa  76.3  0.0000000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.544475 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  39.66 
 
 
466 aa  76.3  0.0000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0179  histidine kinase  34.56 
 
 
758 aa  75.9  0.0000000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2497  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  40.8 
 
 
948 aa  75.9  0.0000000000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0147984  normal  0.803827 
 
 
-
 
NC_011149  SeAg_B2407  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  40.8 
 
 
948 aa  75.9  0.0000000000006  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00000239257  n/a   
 
 
-
 
NC_013440  Hoch_6888  response regulator receiver protein  33.33 
 
 
875 aa  75.9  0.0000000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  0.3668  normal 
 
 
-
 
NC_007575  Suden_0416  histidine kinase  30.59 
 
 
896 aa  75.9  0.0000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  41.38 
 
 
457 aa  75.9  0.0000000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_1187  two component system histidine kinase  34.71 
 
 
683 aa  75.9  0.0000000000006  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.572633  n/a   
 
 
-
 
NC_011083  SeHA_C2511  hybrid sensory kinase in two-component regulatory system with RcsB and YojN  40.8 
 
 
948 aa  75.9  0.0000000000006  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.0476144 
 
 
-
 
NC_010117  COXBURSA331_A0844  PAS/histidine kinase/ATPase domain-containing protein  34.71 
 
 
669 aa  75.9  0.0000000000007  Coxiella burnetii RSA 331  Bacteria  normal  0.644717  n/a   
 
 
-
 
NC_007969  Pcryo_2101  response regulator receiver domain-containing protein  35.54 
 
 
125 aa  75.9  0.0000000000007  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_0738  integral membrane sensor hybrid histidine kinase  38.66 
 
 
925 aa  75.5  0.0000000000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  35.19 
 
 
223 aa  74.7  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  34.26 
 
 
223 aa  75.1  0.000000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0610  response regulator PleD  35.34 
 
 
461 aa  74.7  0.000000000001  Brucella suis 1330  Bacteria  normal  0.961713  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  34.26 
 
 
223 aa  75.1  0.000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  41.75 
 
 
445 aa  74.7  0.000000000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2749  response regulator receiver domain-containing protein  37.74 
 
 
436 aa  74.7  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007925  RPC_3308  response regulator PleD  41.38 
 
 
457 aa  74.7  0.000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.268667  normal 
 
 
-
 
NC_009524  PsycPRwf_2159  response regulator receiver protein  36.28 
 
 
129 aa  75.1  0.000000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2442  response regulator receiver modulated diguanylate cyclase  35.34 
 
 
316 aa  74.7  0.000000000001  Geobacter lovleyi SZ  Bacteria  normal  0.103678  n/a   
 
 
-
 
NC_008347  Mmar10_0766  two component transcriptional regulator  36.15 
 
 
233 aa  74.7  0.000000000001  Maricaulis maris MCS10  Bacteria  normal  0.528482  normal  0.302775 
 
 
-
 
NC_008391  Bamb_3793  multi-sensor hybrid histidine kinase  38.03 
 
 
664 aa  75.1  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.191798 
 
 
-
 
NC_009504  BOV_A0575  response regulator PleD  35.34 
 
 
456 aa  74.7  0.000000000001  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2027  CheA signal transduction histidine kinase  38.41 
 
 
777 aa  74.7  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.162071  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  33.94 
 
 
223 aa  74.3  0.000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  34.26 
 
 
223 aa  74.3  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  34.26 
 
 
223 aa  74.3  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4258  multi-sensor hybrid histidine kinase  40.71 
 
 
663 aa  73.9  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.267585 
 
 
-
 
NC_006274  BCZK1193  response regulator  34.26 
 
 
223 aa  74.3  0.000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_1818  two component reponse regulator  36.21 
 
 
125 aa  74.3  0.000000000002  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4245  multi-sensor hybrid histidine kinase  37.9 
 
 
654 aa  74.3  0.000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0131  response regulator receiver  34.71 
 
 
132 aa  74.3  0.000000000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5978  PAS/PAC sensor hybrid histidine kinase  38.17 
 
 
656 aa  73.9  0.000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.410257  normal 
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  34.26 
 
 
223 aa  74.3  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  34.26 
 
 
223 aa  74.3  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  35.19 
 
 
223 aa  74.7  0.000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1140  CheA signal transduction histidine kinases  38.05 
 
 
2070 aa  74.3  0.000000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.607614 
 
 
-
 
NC_007974  Rmet_5710  PAS/PAC sensor hybrid histidine kinase (bvgS-like)  37.23 
 
 
1040 aa  74.3  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3990  multi-sensor hybrid histidine kinase  38.17 
 
 
666 aa  74.3  0.000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0611  response regulator receiver protein  35.4 
 
 
121 aa  74.7  0.000000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4377  multi-sensor hybrid histidine kinase  38.17 
 
 
666 aa  74.3  0.000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  41.35 
 
 
445 aa  73.9  0.000000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3612  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  38.05 
 
 
796 aa  73.6  0.000000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.463414  normal  0.719468 
 
 
-
 
NC_011989  Avi_4317  chemotaxis receiver protein  33.33 
 
 
122 aa  73.6  0.000000000003  Agrobacterium vitis S4  Bacteria  normal  0.257676  n/a   
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  41.35 
 
 
445 aa  73.9  0.000000000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1567  sensory transduction histidine kinase  36.03 
 
 
855 aa  73.6  0.000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.853487  n/a   
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  41.88 
 
 
457 aa  73.9  0.000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
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