Gene Dbac_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0179 
Symbol 
ID8375813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp207090 
End bp209366 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content59% 
IMG OID644999407 
Producthistidine kinase 
Protein accessionYP_003156722 
Protein GI256827994 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGAATA AAGCCTTTTC CCTGCTGCTG ATGCTGCTGG GCCTGAGCGC TCTCTGCGCG 
CAGGCCCAGA CCGTCCCCGA TATTCTGGTC ATTCACTCCT ACAATCCGGG CCTGAGCTGG
ACCGACGACA TACATCAGGG CATCGTCGAG ACCTTTTCCG GATCCGGCAA GCCCTGGTCG
CTCAGCACCG AGTACCTGGA CGCCAAACGC TACCCGCAAG AACACATTCT TTCGATGCAG
TCGGAACTGA TCGCAACCCA CGTGCGCGAT CACGCCGTAA GCGCGGTGAT TGTCTCCGAT
GACGCGGCGT TCAGCTTCGT TTTGCGACAC CGCGACAAGC TCTTTGAAAA CGTGCCCATC
ATCTTCTGCG GCGTGAACAA TTTCCAGCCG GAAATGCTTG GCGACGCGGA AGGCATCACA
GGCGTATCGG AGATAATCTC CGCGCGCGAG ACACTGGACG CAGCCCTGGC CCTGCACCCC
GATACGCGCA ACGTGGTCGT CATCGGAGGA TCTCTTTCGA GCACGGACAG GTCAAACCGC
AGCCAGTTTC TGCATCTCAT GCCTTCCTAT GCCGGAAGGC TGCGCTTTCA CTTCTGGCAG
GACATCCCCA CCCCGGCCCT GCTGGAAAAA GTCGCGGCCC TAAGCCCAAA AACACTTGTC
TTTCTGGGCA ACGCCATTGC AGGACTGGAT GGCCGCATGC TTGATTTCGG CCCCAGCGTG
GCCCTGGTCA GAGCCAACAC GCAGAGCCCT ATTTATGGAT TCTGGGATTT TTTCCTGGGA
CACGGCATCG TGGGCGGCAA ATTGGTCAAC GGCGCCGAAC ACGGCAGAAT CGCGGCCCGC
ATGGCCCTGC AAATCCTGGA TGGGACCGCG CCTTCAGCGC TGCCCGTAGT CAAGGAAATC
GCCAATCGAT TTCTCTTTGA TCACCGGGAG CTGACGCGTT TCAACCTGGA CGAGAAGGCC
CTGCCCAAAG GCTCCGTCAT CGTGCATCGA CCCCGAAACA TCTTCGAAGC CAACAAGCGG
CTCTTCCTGA TCTTCGGGAG TATCGTCATC GCCCTGCTGG TCATCATCAT CTCCCTGACC
CTGGTTGTGC ACATCCGCAA ACAGACCCTG CTGCAACTGC AATCGGCCAG GCGCAAGGCC
GATGAGGCCA ACGAGGCCAA AAGCCTTTTT CTGGCGCACA TGAGCCACGA AATCCGCACT
CCCCTGACCG GGATCATGGG GCTGGCCGAG CTGGCCATCG GCAATCCCGG CAACCCGGGC
GTGCAGGAAT ATCTGACCCT TATCCGCCAA TCCGGACAGA ATCTGCTGCA CATCATCAAC
GACATCCTCG ATTTCTCGAA AGTCGAAGCC GGAAAAATCG AGCTGCAAAA AAACCGCTTC
AACGCCAGAA GCATGCTCGA AGCCACCATC GCCTTCTTCA AGCCCGGCAT TCGGGAAAAG
GGCGTCACCC TGTCCCTTGT CCTTGCTGAA GAGTTGCCGC AGGCCGTGGT CGGCGACGAG
AACAGGATTC GCCAAATCTT CTTCAATCTG GTCGGCAATG CGGTCAAGTT CACGGAAAAA
GGAAAGATCG AACTGCGTCT GACCGGGCTG ACTTCCGAAG AAAACAGCGC CCGCATGATG
CTCCATTTTG AAATAATGGA CTCCGGGTGC GGCATCCCCG CAGACAAGCA GGACAGTATC
TTCGAGCGCT TCACCCAGGC GGCGCGCTTT CCGACCAGAA CCTATCAGGG CACGGGGCTG
GGGCTGGCCA TCGTCAAGCA GCTCATCGAG GCCATGGGAG GCTCCATCGG GGTGCGCAGC
ACGGAAGGGG TGGGAACCAC CTTCTTCTTC AACATCCCGG TCGAACGGGC GCTGCCGGAA
GAGCCCGCGC AGGACCCGGA CCTGGGCGAC GAATTGCTTG TGCAGGGGCT GTCCGTCCTC
GTGACCGAGG ACAACCCCAT CAACCGCCTC TTCCTGCAAA AATCCCTCGA AAAACTCGGA
CACCGGGTCA TCTGCGCCGT CAATGGCCAG GAAGCGCTTG ATCTTCTGCA AACGGCCACC
GTGGACTGCG TGCTCATGGA CATCCAGATG CCGGTCATGG ATGGAAGCAT GGCCACACGG
CATATTCGGG AAAGATTCGG GCACAGCCTG CCCGTCATCG CGCTCACGGC CCACGCCCTA
CACGGGGACA GGGAAAAGTA TCTGGAAGAC GGGTTTGACG AATATCTGGC CAAACCCGTC
TCCATCAAGG ACCTGACCAA GATCATCGCT CGCGTATGCG GCAAAAAATC GTCTTGA
 
Protein sequence
MWNKAFSLLL MLLGLSALCA QAQTVPDILV IHSYNPGLSW TDDIHQGIVE TFSGSGKPWS 
LSTEYLDAKR YPQEHILSMQ SELIATHVRD HAVSAVIVSD DAAFSFVLRH RDKLFENVPI
IFCGVNNFQP EMLGDAEGIT GVSEIISARE TLDAALALHP DTRNVVVIGG SLSSTDRSNR
SQFLHLMPSY AGRLRFHFWQ DIPTPALLEK VAALSPKTLV FLGNAIAGLD GRMLDFGPSV
ALVRANTQSP IYGFWDFFLG HGIVGGKLVN GAEHGRIAAR MALQILDGTA PSALPVVKEI
ANRFLFDHRE LTRFNLDEKA LPKGSVIVHR PRNIFEANKR LFLIFGSIVI ALLVIIISLT
LVVHIRKQTL LQLQSARRKA DEANEAKSLF LAHMSHEIRT PLTGIMGLAE LAIGNPGNPG
VQEYLTLIRQ SGQNLLHIIN DILDFSKVEA GKIELQKNRF NARSMLEATI AFFKPGIREK
GVTLSLVLAE ELPQAVVGDE NRIRQIFFNL VGNAVKFTEK GKIELRLTGL TSEENSARMM
LHFEIMDSGC GIPADKQDSI FERFTQAARF PTRTYQGTGL GLAIVKQLIE AMGGSIGVRS
TEGVGTTFFF NIPVERALPE EPAQDPDLGD ELLVQGLSVL VTEDNPINRL FLQKSLEKLG
HRVICAVNGQ EALDLLQTAT VDCVLMDIQM PVMDGSMATR HIRERFGHSL PVIALTAHAL
HGDREKYLED GFDEYLAKPV SIKDLTKIIA RVCGKKSS