| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0179 |
|---|
| Symbol | |
|---|
| ID | 8375813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 207090 |
|---|
| End bp | 209366 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644999407 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003156722 |
|---|
| Protein GI | 256827994 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTGGAATA AAGCCTTTTC CCTGCTGCTG ATGCTGCTGG GCCTGAGCGC TCTCTGCGCG
CAGGCCCAGA CCGTCCCCGA TATTCTGGTC ATTCACTCCT ACAATCCGGG CCTGAGCTGG
ACCGACGACA TACATCAGGG CATCGTCGAG ACCTTTTCCG GATCCGGCAA GCCCTGGTCG
CTCAGCACCG AGTACCTGGA CGCCAAACGC TACCCGCAAG AACACATTCT TTCGATGCAG
TCGGAACTGA TCGCAACCCA CGTGCGCGAT CACGCCGTAA GCGCGGTGAT TGTCTCCGAT
GACGCGGCGT TCAGCTTCGT TTTGCGACAC CGCGACAAGC TCTTTGAAAA CGTGCCCATC
ATCTTCTGCG GCGTGAACAA TTTCCAGCCG GAAATGCTTG GCGACGCGGA AGGCATCACA
GGCGTATCGG AGATAATCTC CGCGCGCGAG ACACTGGACG CAGCCCTGGC CCTGCACCCC
GATACGCGCA ACGTGGTCGT CATCGGAGGA TCTCTTTCGA GCACGGACAG GTCAAACCGC
AGCCAGTTTC TGCATCTCAT GCCTTCCTAT GCCGGAAGGC TGCGCTTTCA CTTCTGGCAG
GACATCCCCA CCCCGGCCCT GCTGGAAAAA GTCGCGGCCC TAAGCCCAAA AACACTTGTC
TTTCTGGGCA ACGCCATTGC AGGACTGGAT GGCCGCATGC TTGATTTCGG CCCCAGCGTG
GCCCTGGTCA GAGCCAACAC GCAGAGCCCT ATTTATGGAT TCTGGGATTT TTTCCTGGGA
CACGGCATCG TGGGCGGCAA ATTGGTCAAC GGCGCCGAAC ACGGCAGAAT CGCGGCCCGC
ATGGCCCTGC AAATCCTGGA TGGGACCGCG CCTTCAGCGC TGCCCGTAGT CAAGGAAATC
GCCAATCGAT TTCTCTTTGA TCACCGGGAG CTGACGCGTT TCAACCTGGA CGAGAAGGCC
CTGCCCAAAG GCTCCGTCAT CGTGCATCGA CCCCGAAACA TCTTCGAAGC CAACAAGCGG
CTCTTCCTGA TCTTCGGGAG TATCGTCATC GCCCTGCTGG TCATCATCAT CTCCCTGACC
CTGGTTGTGC ACATCCGCAA ACAGACCCTG CTGCAACTGC AATCGGCCAG GCGCAAGGCC
GATGAGGCCA ACGAGGCCAA AAGCCTTTTT CTGGCGCACA TGAGCCACGA AATCCGCACT
CCCCTGACCG GGATCATGGG GCTGGCCGAG CTGGCCATCG GCAATCCCGG CAACCCGGGC
GTGCAGGAAT ATCTGACCCT TATCCGCCAA TCCGGACAGA ATCTGCTGCA CATCATCAAC
GACATCCTCG ATTTCTCGAA AGTCGAAGCC GGAAAAATCG AGCTGCAAAA AAACCGCTTC
AACGCCAGAA GCATGCTCGA AGCCACCATC GCCTTCTTCA AGCCCGGCAT TCGGGAAAAG
GGCGTCACCC TGTCCCTTGT CCTTGCTGAA GAGTTGCCGC AGGCCGTGGT CGGCGACGAG
AACAGGATTC GCCAAATCTT CTTCAATCTG GTCGGCAATG CGGTCAAGTT CACGGAAAAA
GGAAAGATCG AACTGCGTCT GACCGGGCTG ACTTCCGAAG AAAACAGCGC CCGCATGATG
CTCCATTTTG AAATAATGGA CTCCGGGTGC GGCATCCCCG CAGACAAGCA GGACAGTATC
TTCGAGCGCT TCACCCAGGC GGCGCGCTTT CCGACCAGAA CCTATCAGGG CACGGGGCTG
GGGCTGGCCA TCGTCAAGCA GCTCATCGAG GCCATGGGAG GCTCCATCGG GGTGCGCAGC
ACGGAAGGGG TGGGAACCAC CTTCTTCTTC AACATCCCGG TCGAACGGGC GCTGCCGGAA
GAGCCCGCGC AGGACCCGGA CCTGGGCGAC GAATTGCTTG TGCAGGGGCT GTCCGTCCTC
GTGACCGAGG ACAACCCCAT CAACCGCCTC TTCCTGCAAA AATCCCTCGA AAAACTCGGA
CACCGGGTCA TCTGCGCCGT CAATGGCCAG GAAGCGCTTG ATCTTCTGCA AACGGCCACC
GTGGACTGCG TGCTCATGGA CATCCAGATG CCGGTCATGG ATGGAAGCAT GGCCACACGG
CATATTCGGG AAAGATTCGG GCACAGCCTG CCCGTCATCG CGCTCACGGC CCACGCCCTA
CACGGGGACA GGGAAAAGTA TCTGGAAGAC GGGTTTGACG AATATCTGGC CAAACCCGTC
TCCATCAAGG ACCTGACCAA GATCATCGCT CGCGTATGCG GCAAAAAATC GTCTTGA
|
|---|
| Protein sequence | MWNKAFSLLL MLLGLSALCA QAQTVPDILV IHSYNPGLSW TDDIHQGIVE TFSGSGKPWS
LSTEYLDAKR YPQEHILSMQ SELIATHVRD HAVSAVIVSD DAAFSFVLRH RDKLFENVPI
IFCGVNNFQP EMLGDAEGIT GVSEIISARE TLDAALALHP DTRNVVVIGG SLSSTDRSNR
SQFLHLMPSY AGRLRFHFWQ DIPTPALLEK VAALSPKTLV FLGNAIAGLD GRMLDFGPSV
ALVRANTQSP IYGFWDFFLG HGIVGGKLVN GAEHGRIAAR MALQILDGTA PSALPVVKEI
ANRFLFDHRE LTRFNLDEKA LPKGSVIVHR PRNIFEANKR LFLIFGSIVI ALLVIIISLT
LVVHIRKQTL LQLQSARRKA DEANEAKSLF LAHMSHEIRT PLTGIMGLAE LAIGNPGNPG
VQEYLTLIRQ SGQNLLHIIN DILDFSKVEA GKIELQKNRF NARSMLEATI AFFKPGIREK
GVTLSLVLAE ELPQAVVGDE NRIRQIFFNL VGNAVKFTEK GKIELRLTGL TSEENSARMM
LHFEIMDSGC GIPADKQDSI FERFTQAARF PTRTYQGTGL GLAIVKQLIE AMGGSIGVRS
TEGVGTTFFF NIPVERALPE EPAQDPDLGD ELLVQGLSVL VTEDNPINRL FLQKSLEKLG
HRVICAVNGQ EALDLLQTAT VDCVLMDIQM PVMDGSMATR HIRERFGHSL PVIALTAHAL
HGDREKYLED GFDEYLAKPV SIKDLTKIIA RVCGKKSS
|
|---|
| |