| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4113 |
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| Symbol | |
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| ID | 6160664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4618081 |
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| End bp | 4620486 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666891 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001793130 |
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| Protein GI | 171060781 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0059237 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCT CGCTGCTGCA GGAACTCGAC CCGCGCAACC ACGCGCCCCT GCTGGCGCGC
CTGCTGGCGA TCGCCGACGA CGCGGTGATC GTGGCGGATG CGGCGCAGCG CATCGTGCTG
TTCAACGAAG GCGCCGAGCG GGTGTTCGGC TACCGGCTGG CCGAGGTGCT GGGCCAGCCG
CTGGCGATGC TGCTGCCCGA ACCGGCGCGC GCCGCGCACG CCGGCCACCT GCGCGCGTTT
GCGCAGTCGG CGCTGCCGGC GCGTCGCATG GCCGAGCGGC GCGACATCCA CGGCCGGCGC
GCCGACGGCG TCCTGTTCGA TGCCGAGGCG TCGATCTCGC ACGTCGAGCT CGACGGCCAG
ACCTATTTCG CCGCCATCCT GCGCGACGTC AGCGAAAGCC GCCAGGCCCG CCGTGCGCTC
GAACGCGCCA AGGCCGAGGC CGAGGCCGCC GAGCGCGCCA AGAGCCTGTT CCTGGCCAAC
ATGAGCCACG AGATCCGCAC GCCGCTCAAC GCCGTGATCG GCATGACGAC GCTGCTGATG
GATACGCCGA TGTCCGACGA GCAGCTCGAT TTCGCCCGCA CCATCCGCGC CAGCGGCGAG
ACGCTGCTGG GCGTGATCAA CGACATCCTC GACTTCTCGA AGGCCGACGT CGGCAAGCTC
GAGATCGAGC AGCAGCGCTT CGACCTGCGC CGCTGCGTCG AGGATGCGCT CGACCTGGTG
GCGCCGCGTG CGCTCGAGAA ACGCCTCAAC CTGGCCTACC TGATCGAGGA CGGCACACCC
GAGAACCTGG TCGGCGACGT CACCCGGATC CGCCAGATCC TGGCCAACCT GCTGTCCAAC
GCGGTCAAGT TCACGCACCA GGGCGAGGTG CTCGTGATCA TCGACAGCGA GCCGGTCGAC
GCCGGCGACG GGCCGCTGCA CCGCATCCAC TTCGCGGTGC AGGACTCGGG CATCGGCATC
GCCGCCGAAC ACCTGCCGCG GCTGTTCCAG TCGTTCACGC AGGTCGATGC CTCGACCACC
CGCAAATACG GCGGCACCGG CCTGGGCCTG GCGATCAGCA AGCGGCTGGC CGAGCTGATG
GGCGGGACGG TGTCGGTGCA GAGCGAGCCG GGGCAGGGCT CGGTGTTCCG GGTGTCGGTG
CTGGCGCGTG CGGCGGAGGC TCCCGAGCCG GCGGATTTCC TGCAGCGCAA CGTGCCGGCG
CTGGTCGGCA AGCGGCTGCT GATCGTCGAC GACAACCTCA CCAACCGCCG CATCCTGACG
CGCATGGCGA TGCTGTGGGG CATGCTGCCG TCGACCCTGC CGTCGGCGCT GGAGGCGCTC
GACCGCATCC GCCACGGCGA GCGTTACGAC GCCGCGGTGC TCGACATGAG CCTGCCCGGC
ATCGACGGCC TGGAGCTGGC GGTCGAGATC CGGCGCCGGC GCAGCGCCGA GGAGCTGCCG
ATCGTGATGC TGACCTCGCT CGGCCAGCGC CACGCGCTGG CCGACGAGCA GCGCGCCGGG
CTGGCGGCCT TCCTGTCCAA GCCGATCAAG GCCAGCGCGC TGTTTGCCAC GCTGGTGGCG
GTGGTGCAGG GCCGCCAGCG CGCCGCGCCG GCCGGGCCTG CGCCCGGTCC GCAGCCGCTC
GCCGCCAGCC TGCCGCTGCG GGTGCTGGTG GCCGAGGACA ACGCCGTCAA CCAGCGTGTC
GCGCTGCGCC TGCTGCAGCG CCTGGGTTAT CAGGCCGACG TGGCCGCCAA CGGGCTGGAG
GTGATCGAGG CGGTCGAGCG CCAGGCCTAT TCGGTGGTGC TGATGGACAT CCAGATGCCC
GAGATGGACG GCCTGCAGGC GGCGCGCTGG ATCCGCCAGC GGCGCGGCCC GCAAGGCCTG
CCGCGCATCA TCGCGATGAC CGCCAACGCG ATGCCGGGCG ACCGCGAGGC CTATCTGGCC
GCCGGCATGG ACGGCTACGT CGCCAAGCCG ATCGAGCCCG ACGAACTGGC CGCCGCGCTG
CGCCGGGCGG GCTCGCCGGC CGGCGGGACT GTGGCGCCGG GCGGTGCGGC CGCGAGCCGA
ACGCCGGCCG ACGACACCGT GCTCGACGCG CTGCGCCTCG AACACCTGCG CACGCTGCAG
GACGACGGCC AGCCGAGCCT GGTGCGCGAG CTGATCGACC TGTTCGTGGC CGACGCGCCC
GGCCATGTCG ACGCGCTGGC GCAGGCGCTG CAGGGCACCG ACGCGCGCCG GCTGGCGAGC
CTGGCGCACC GCTTCCTCTC GGTCACCGAC AACATCGGCG CGCGCCGGCT GTCGGCGCTG
TGCGTCGAGA TCGAGCGGCT GGCGCGGCGC GGCGAACTCG ACGGCCTGGA GCGGCTGGTC
GAGGCGCTGA GCCACGAACA CGCGCAGGCC CACGCCGCCT TGCTGGCGGT GCGCACGCGG
TACTGA
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| Protein sequence | MNRSLLQELD PRNHAPLLAR LLAIADDAVI VADAAQRIVL FNEGAERVFG YRLAEVLGQP
LAMLLPEPAR AAHAGHLRAF AQSALPARRM AERRDIHGRR ADGVLFDAEA SISHVELDGQ
TYFAAILRDV SESRQARRAL ERAKAEAEAA ERAKSLFLAN MSHEIRTPLN AVIGMTTLLM
DTPMSDEQLD FARTIRASGE TLLGVINDIL DFSKADVGKL EIEQQRFDLR RCVEDALDLV
APRALEKRLN LAYLIEDGTP ENLVGDVTRI RQILANLLSN AVKFTHQGEV LVIIDSEPVD
AGDGPLHRIH FAVQDSGIGI AAEHLPRLFQ SFTQVDASTT RKYGGTGLGL AISKRLAELM
GGTVSVQSEP GQGSVFRVSV LARAAEAPEP ADFLQRNVPA LVGKRLLIVD DNLTNRRILT
RMAMLWGMLP STLPSALEAL DRIRHGERYD AAVLDMSLPG IDGLELAVEI RRRRSAEELP
IVMLTSLGQR HALADEQRAG LAAFLSKPIK ASALFATLVA VVQGRQRAAP AGPAPGPQPL
AASLPLRVLV AEDNAVNQRV ALRLLQRLGY QADVAANGLE VIEAVERQAY SVVLMDIQMP
EMDGLQAARW IRQRRGPQGL PRIIAMTANA MPGDREAYLA AGMDGYVAKP IEPDELAAAL
RRAGSPAGGT VAPGGAAASR TPADDTVLDA LRLEHLRTLQ DDGQPSLVRE LIDLFVADAP
GHVDALAQAL QGTDARRLAS LAHRFLSVTD NIGARRLSAL CVEIERLARR GELDGLERLV
EALSHEHAQA HAALLAVRTR Y
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