Gene Daro_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3686 
Symbol 
ID3566798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3960141 
End bp3962003 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content60% 
IMG OID637682159 
Productresponse regulator receiver:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal 
Protein accessionYP_286885 
Protein GI71909298 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.926172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTCC GCACCAAGAC CATCCTTGGC GTCGCCCTGA TCGAGGGGGT CTTGCTGGCC 
ATACTGGGTA TCGGCATCCT CAGTCTTTTC CGCGATGCCA ACGAACAGCA AATCACCCGC
CGGGCTGCCG TCTCGGCCCG TCTGCTGGCT GCCAGCGCCC GCGATGCCAT GGTCGCCTAC
GACCTGGCCA CCATCGATGG CATTGCCAGC GATGTACTGG AGACCGGCGA AATCAGCTAC
GTCCGCTTCC TCGACGGGCA AGGCCGGGTG ATGGTCGAGC GCGGAGCATT GCCGAGCCAG
CCTGAATTTG CAGCCGGCGT TTCACAGACG GAAGATGGCG TACTCGACCG GGCAGTACCG
ATTACCGTTT CCGGCGAAAG CTTTGGCCAG ATCCAGTTTG GCATCGACAT TGCCCCTTTC
ACGCTGGCGC TTAACCGGAC GCAACGCTGG TTCATGGCGC TCTCGGCGCT CGAAATGGGA
CTGGTTGCCT TCTTCTCGCT GATTCTGGGC ACCTACCTGA CCCGCCAGCT GACCGCATTG
CGCAACGCCA GCCGGGAAAT TGCCGAAGGC CGCTTCGACC GCCCCCTGAA AATCGACGGC
AATGACGAAC TGGCCGAAAC GGCACAAGCC TTTAATCACA TGGTCGAAAA AGTTGCCGGA
AGCATTTCCA GCCTGCGGGA AAGCAAGGCC AAGCTGCGCC AGGCCAAGGA GGAAGCGGAA
AGCGCCAACG CTGCAAAAAG CCAGTTCCTG GCCAATATGA GCCACGAATT GCGTACTCCG
ATGACCGGCA TCATCGGCAT GAGTTTCCTG ATGATGCGCA CCGAACTTGA CGAACAGCAG
CGCGATTTCG CCGACACCAT TCAGCGCAGC GCCAATGCCC TGCTCATCAT CATCAACGAC
ATTCTCGATC TCTCTGCCAT CGAAGCAGAA AAGCTGCGGC TGGCCCATGC CAACTATTCC
GCACGCAAAG TCATCGGCGA AGTACTGGCC CTGATCTCCC CAAGCGCCGA CGCCAAGAAC
ATTTCCCTCA TCAGCCAGAT CGCTGACGAC TTGCCGGAAA TACTGGTCGG CGATGCCATT
CGTCTGCGCC AGGTCTTGCT CAACCTGCTC GGCAACGCCA TCAAGTTCAC CGAACAAGGC
TCGGTCACCC TTGAAGTGGC TCACCAGCCA ACGGATGATG GCCGACAACG CCTGAATTTT
GTGGTTCGTG ACACCGGCAT CGGCATGACG CCAGGCGTCG TCAACGCCCT GTTCACCCCG
TTCTTTCAGG CCGATTTGAG CAACACGCGA CGCTTTGGCG GAACAGGACT GGGTCTCTCG
ATCAGTCGCC GCCTGATCGA ATTGATGCAC GGCGAAATCA GCGCCGAATC AGAACCGGAC
GTTGGCAGCA CCTTCCGCTT TCACATCGTC GCCGATCTGC CTGAAACATC GGTCGCCGAA
GAACAACCCC AAAAGGCCGA CGGTGAGCGC CACTTCGATG CCCGACGCAT TCTGGTCGTC
GATGACCGGC AGATCAATCG CAAGGTTGTC GGCGCCATGC TCGAAAGGCT GGGCTGCCAC
GTCCTGATGG CCGAGCACGG CGAAGAGGCG CTGGCCCGGC TCGCCACGGA GGTGGTCGAT
CTGGTGCTGA TGGATTGCCA GATGCCGGTC ATGGATGGCT TTGAAGCCAC CCGACGCATC
CGTGAAGGAG AGGACAGCAG AATCGATCCG GCCACCAAGA TTATCGCGAT GACGGCTAAT
GCCATGGAGG GCGACAAGCA GCGCTGCCTG GCTGCCGGCA TGAACGACTA CATCAGCAAG
CCGATCTTCG CTGCGGAACT GGAACGTATC CTGACGACCT GGCTGCCCGC AACACCGGCT
TGA
 
Protein sequence
MKFRTKTILG VALIEGVLLA ILGIGILSLF RDANEQQITR RAAVSARLLA ASARDAMVAY 
DLATIDGIAS DVLETGEISY VRFLDGQGRV MVERGALPSQ PEFAAGVSQT EDGVLDRAVP
ITVSGESFGQ IQFGIDIAPF TLALNRTQRW FMALSALEMG LVAFFSLILG TYLTRQLTAL
RNASREIAEG RFDRPLKIDG NDELAETAQA FNHMVEKVAG SISSLRESKA KLRQAKEEAE
SANAAKSQFL ANMSHELRTP MTGIIGMSFL MMRTELDEQQ RDFADTIQRS ANALLIIIND
ILDLSAIEAE KLRLAHANYS ARKVIGEVLA LISPSADAKN ISLISQIADD LPEILVGDAI
RLRQVLLNLL GNAIKFTEQG SVTLEVAHQP TDDGRQRLNF VVRDTGIGMT PGVVNALFTP
FFQADLSNTR RFGGTGLGLS ISRRLIELMH GEISAESEPD VGSTFRFHIV ADLPETSVAE
EQPQKADGER HFDARRILVV DDRQINRKVV GAMLERLGCH VLMAEHGEEA LARLATEVVD
LVLMDCQMPV MDGFEATRRI REGEDSRIDP ATKIIAMTAN AMEGDKQRCL AAGMNDYISK
PIFAAELERI LTTWLPATPA