| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1308 |
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| Symbol | rcsC |
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| ID | 5799774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1363453 |
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| End bp | 1366302 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641339273 |
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| Product | hybrid sensory kinase in two-component regulatory system with RcsB and YojN |
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| Protein accession | YP_001605841 |
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| Protein GI | 162418760 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00392012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATATC TCTCTTCATT CCGTACGACA CTAAAAATAT CCCGCTACTT ATTCCGGGTA
TTGGCCGTTA TGTTATGGTC GCTTGGCGCA TTATTGACCA CTTTTTATAT CCTGAATGTA
CTTAACGAAA AAAAAGCCGA TATTCGTCAG GAATATAACA ACAACTTTGG TTTGGCGCAG
AACTACATCC GGCATTCCGC TGAAATTATA CGCGATATCA AATATATGGC GGAAAATCGG
CTAGATAAAA ACGCCAGTGA CACTGATGCC ACTAGTGGCA TGGTTATGAA TAAAAAGGCG
GTACCACAAT ATTACCCGCT TAACTCAGAT TCAGGTTGCA CGACGGCTAG CACGTCTAAT
CAAGCGTCAG TGAATACTCT CAGTAACCTT ATTTGGTACT GGAAGGAGAA CTTTACTGCC
GCTTATGATC TCAATCGTGT CTTTTTTATT GGCACGGATA CGTTGTGTAT GGTGGATTTT
GACATCCGTA ATGCTCCATC GCTGCAAGAA AACCTGCTTA AGTCGCTGTA TGAGCATACC
TTAAAGTACC GTGATACCAA GAATCAGGAT AAAGACAGCA ATATTTACTG GGTGGTACCT
GGTGCTCGTC CCGATATTGG CGTCTTGTAT GTTCTAAGCC CCGTTTATCT AGGTAATAGA
TTAGAGGCTA TGATTGGCTT TGAGCAGAGT GTCCGCTTAG AGGATTTTAT TTCTTCCCGA
ACACTGCCTA TCAGAGTGAC CTTATTAAAT CAGGATAATG AACCCGTGTT ACAGATGGCA
TCAGGTGATC GTTATCCGGC TATACTGGAT GATTATCCTG ATTCACCATC TTACTTTGGT
TATGCTGATG ATTATAAAGA TCTTATTCTA AAGAAAGCTT TACCACCATC CCCCCTCAGT
ATTGCTTATT CATTACCCGT CAAAACGATA ATAGAAGCAT TCAAATTATT GATTTTCAAT
GCGTTACTTC TTAATGTGCT CTCTGCCGTA GTGATTTTTA CATTGGCTTG GCTATTTGAG
CGAAAAATGT TTCATCCGGC TGAAGATAAT GCGCTGAGGC TTGAGGAGCA CGAGCAATTC
AACCGCAAAA TTGTGGCCTC GGCTCCTGTT GGGATATCCA TTTTGCGTAT CAGTGATGGT
ACTAACATCC TGAGTAATGA ATTGGCACAT AATTATATTA GTTTACTGAC TAATGAAGAT
CGGGAACGTA TTACGCGCAT TATTTGTGAG CGTCAGGCTA ACTTTGTCGA TGTAATGACC
AGCAACAACA ATAATCTGCA AATTAGCTTT GTTCATTCAC GTTATAGAAA TGAAGATGTG
GCGATTTGTG TGTTGGTTGA TGTCAGTGCT CGGGTCAAAA TGGAGGAATC ACTACAAGAA
ATGGCTACGG CGGCAGAGCA AGCCAGTCAA TCAAAATCCA TGTTTCTGGC TACCGTTAGT
CATGAATTGC GCACACCGCT GTATGGCATT ATCGGTAACC TCGATTTATT GCAAACGAAA
GAATTACCGC AGGGAGTCGA TCGGCTGGTA ACGGCAATGA ATAATTCGTC GGGGTTATTA
TTGAAAATTA TCAGTGACAT ACTCGATTTT TCTAAAATAG AGTCTGAACA GCTGAAAATC
GAGCCAAGCG AGTTTTCTAC TGTGGAAGTG ATTACCCATA TCACGGCTAA CTATTTGCCA
TTGGTCGTCA AAAAACGGTT AGGACTGTAT TGTTTTATTG AACCGGATGT CCCACGGCTC
ATAGAAGGTG ACCCGGTTCG CCTACAACAG GTGATTTCTA ATCTCCTGAA TAATGCCATT
AAATTTACCG ATACAGGCTG CATCATTTTG CAGGTACGCG TGCGTGATTG CTATCTGGAG
TTTCGGGTGC GGGATACCGG TGTGGGTATT GATTCACGTG AAATTAATCA ACTATTTGAT
CCTTTCTTCC AAGTGGGTAC CGGTGTCCAA CGCCATTTTC AGGGAACCGG ATTAGGGCTG
GCTATTTGTG AGAAGTTAGT CAACCTAATG GATGGCGATG TCGAAGTCAT ATCTGAATTG
GGGATGGGGA GTATTTTTGC TATCCGTATT CCCTTGTATC ATCACCAAAA TACCGTCCTG
TCCGCCAATG ATCGCTGGCA AGGAAAAGTG CTGTGGTTAG ATATTCGCAA TGCACGCCTG
GAGAGCTATT TACTCGATCT ACTTGGCTAC TTTGGTGCGA CAATTCGGCG TTACTGTGGT
GAGCAGACTC AGCCGGAAGA TGTGCTGATT TGCGATTATC CGTCACAACT CAGCCCCCCT
TTACTGGCAT GGATCCAACT CTCCATTGAA CATATTGGTT TACCACAAGA GACGCGCCCT
GCTTACTGGT CACTGAGTAC CTCAACTTTA CTGGAGATAG TCCCCTTGCT GGACTGGATA
CTGCGGGGCC AGCAGCCGGT TGATAATTCA TCGTTACAGT TACATGCACC GAAAACGAAT
CAAGATAATA ATGCCGATCT GCAAATTCTG GTTGTGGATG ACCATCCGAT TAACCGCCGT
TTACTGGCAG ATCAGCTCAC CACTTTGGGT TATCGAGTCA TTACGGCTAA TGATGGCTTG
GATGCATTGG TGGCGTTAAA TACTAATACC GTGGATATGG TATTGACCGA TGTGAACATG
CCAAATATGG ATGGTTACCG TTTAACTGAG CGTTTGCGGC AGTTGAATCA CAATTTCCCG
ATTATTGGTG TAACCGCGAA TGCTTTGGCT GAGGGAAAAC AACGTTGCAT TGAGGCGGGG
ATGGATAATT GCCTGTCGAA GCCTGTGACG CTGGATACTC TGCGCCAGAT GCTGCTTTAC
TACAGTGACC AAGTACGGCG ATCACGTTAG
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| Protein sequence | MKYLSSFRTT LKISRYLFRV LAVMLWSLGA LLTTFYILNV LNEKKADIRQ EYNNNFGLAQ
NYIRHSAEII RDIKYMAENR LDKNASDTDA TSGMVMNKKA VPQYYPLNSD SGCTTASTSN
QASVNTLSNL IWYWKENFTA AYDLNRVFFI GTDTLCMVDF DIRNAPSLQE NLLKSLYEHT
LKYRDTKNQD KDSNIYWVVP GARPDIGVLY VLSPVYLGNR LEAMIGFEQS VRLEDFISSR
TLPIRVTLLN QDNEPVLQMA SGDRYPAILD DYPDSPSYFG YADDYKDLIL KKALPPSPLS
IAYSLPVKTI IEAFKLLIFN ALLLNVLSAV VIFTLAWLFE RKMFHPAEDN ALRLEEHEQF
NRKIVASAPV GISILRISDG TNILSNELAH NYISLLTNED RERITRIICE RQANFVDVMT
SNNNNLQISF VHSRYRNEDV AICVLVDVSA RVKMEESLQE MATAAEQASQ SKSMFLATVS
HELRTPLYGI IGNLDLLQTK ELPQGVDRLV TAMNNSSGLL LKIISDILDF SKIESEQLKI
EPSEFSTVEV ITHITANYLP LVVKKRLGLY CFIEPDVPRL IEGDPVRLQQ VISNLLNNAI
KFTDTGCIIL QVRVRDCYLE FRVRDTGVGI DSREINQLFD PFFQVGTGVQ RHFQGTGLGL
AICEKLVNLM DGDVEVISEL GMGSIFAIRI PLYHHQNTVL SANDRWQGKV LWLDIRNARL
ESYLLDLLGY FGATIRRYCG EQTQPEDVLI CDYPSQLSPP LLAWIQLSIE HIGLPQETRP
AYWSLSTSTL LEIVPLLDWI LRGQQPVDNS SLQLHAPKTN QDNNADLQIL VVDDHPINRR
LLADQLTTLG YRVITANDGL DALVALNTNT VDMVLTDVNM PNMDGYRLTE RLRQLNHNFP
IIGVTANALA EGKQRCIEAG MDNCLSKPVT LDTLRQMLLY YSDQVRRSR
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